RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 RETSATQ6NUM9 610 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 ESRP1Q6NXG1 681 aaKnown RBP13.64□□□□□ -0.23
COPS3-218ENST00000584216 C22orf39Q6P5X5 142 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 LRRC31Q6UY01 552 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 DEFB106AQ8N104 65 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 DENND6BQ8NEG7 585 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 OR52K2Q8NGK3 314 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 LMO3Q8TAP4 145 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 LIN37Q96GY3 246 aaPredicted RBP13.64□□□□□ -0.23
COPS3-218ENST00000584216 PRR11Q96HE9 360 aaPredicted RBP13.64□□□□□ -0.23
COPS3-218ENST00000584216 CEP44Q9C0F1 390 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 WDR70Q9NW82 654 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 PCDHGA7Q9Y5G6 932 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 A0A1W2PNU3 283 aaPredicted RBP13.63□□□□□ -0.23
COPS3-218ENST00000584216 THAP12O43422 761 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 TSPAN6O43657 245 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 PAGE1O75459 146 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 LEFTY1O75610 366 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 MT-CO1P00395 513 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 CENPBP07199 599 aaPredicted RBP13.63□□□□□ -0.23
COPS3-218ENST00000584216 GNA15P30679 374 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 THOP1P52888 689 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 PMS1P54277 932 aaKnown RBP13.63□□□□□ -0.23
COPS3-218ENST00000584216 SLC20A2Q08357 652 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 PNOCQ13519 176 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 TAF5Q15542 800 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 ATG14Q6ZNE5 492 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 USP53Q70EK8 1073 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 ENOSF1Q7L5Y1 443 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 ARHGEF19Q8IW93 802 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 CHST14Q8NCH0 376 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 EHBP1Q8NDI1 1231 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 ZNF606Q8WXB4 792 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 ASB12Q8WXK4 309 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 RAB7BQ96AH8 199 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 ARHGEF26Q96DR7 871 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 SGF29Q96ES7 293 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 FAM81BQ96LP2 452 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 BOCQ9BWV1 1114 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 SLC13A1Q9BZW2 595 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 STRADBQ9C0K7 418 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 SIK2Q9H0K1 926 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 GOLPH3LQ9H4A5 285 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 SYNDIG1Q9H7V2 258 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 RRN3Q9NYV6 651 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 APOBEC3BQ9UH17 382 aaKnown RBP13.63□□□□□ -0.23
COPS3-218ENST00000584216 HOOK1Q9UJC3 728 aaKnown RBP13.63□□□□□ -0.23
COPS3-218ENST00000584216 FADS3Q9Y5Q0 445 aa13.63□□□□□ -0.23
COPS3-218ENST00000584216 TRIM49BA6NDI0 452 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 LMO7DNF2Z398 122 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 K7ERQ8 282 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 M0QYT0 321 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 NEMP1O14524 444 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 PLD2O14939 933 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 SNAP91O60641 907 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 ANXA6P08133 673 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 L1CAMP32004 1257 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 IRAK1P51617 712 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 BRMS1LQ5PSV4 323 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 CRTC1Q6UUV9 634 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 ZNF783Q6ZMS7 281 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 DPY19L3Q6ZPD9 716 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 C11orf57Q6ZUT1 292 aaPredicted RBP13.62□□□□□ -0.23
COPS3-218ENST00000584216 C14orf80Q86SX3 495 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 PCDH20Q8N6Y1 951 aaKnown RBP13.62□□□□□ -0.23
COPS3-218ENST00000584216 SCG3Q8WXD2 468 aaKnown RBP13.62□□□□□ -0.23
COPS3-218ENST00000584216 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 DHTKD1Q96HY7 919 aaPredicted RBP13.62□□□□□ -0.23
COPS3-218ENST00000584216 PPP1R13BQ96KQ4 1090 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 KREMEN1Q96MU8 473 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 PSMB7Q99436 277 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 CCDC3Q9BQI4 270 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 HEPHQ9BQS7 1158 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 C1QTNF7Q9BXJ2 289 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 TNKS2Q9H2K2 1166 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 WDCPQ9H6R7 721 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 SEPT10Q9P0V9 454 aa13.62□□□□□ -0.23
COPS3-218ENST00000584216 TOR1BO14657 336 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 SMAD6O43541 496 aaKnown RBP13.61□□□□□ -0.23
COPS3-218ENST00000584216 DAB1O75553 588 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 ADCY5O95622 1261 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 GNA14O95837 355 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 OR1E1P30953 314 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 NOS2P35228 1153 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 SERPINH1P50454 418 aaKnown RBP13.61□□□□□ -0.23
COPS3-218ENST00000584216 PFN3P60673 137 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 FGL2Q14314 439 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 PRRT3Q5FWE3 981 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 PERM1Q5SV97 790 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 LINGO4Q6UY18 593 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 JAMLQ86YT9 394 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 FBXO39Q8N4B4 442 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 ZSCAN1Q8NBB4 408 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 C1QTNF2Q9BXJ5 285 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 INTS2Q9H0H0 1204 aaKnown RBP13.61□□□□□ -0.23
COPS3-218ENST00000584216 UBE2TQ9NPD8 197 aaPredicted RBP13.61□□□□□ -0.23
COPS3-218ENST00000584216 STARD5Q9NSY2 213 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 KLF15Q9UIH9 416 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 ACSL6Q9UKU0 697 aa13.61□□□□□ -0.23
COPS3-218ENST00000584216 STAP1Q9ULZ2 295 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms