RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 SLCO2A1Q92959 643 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 TEKT5Q96M29 485 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 CCDC114Q96M63 670 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 MGME1Q9BQP7 344 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 RBM12Q9NTZ6 932 aaKnown RBP11.85□□□□□ -0.51
CDRT1-207ENST00000583965 RBM22Q9NW64 420 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDRT1-207ENST00000583965 SLCO3A1Q9UIG8 710 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 HCN2Q9UL51 889 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 ATP8A1Q9Y2Q0 1164 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 FARP1Q9Y4F1 1045 aaPredicted RBP11.85□□□□□ -0.51
CDRT1-207ENST00000583965 EDDM13A0A1B0GTR0 161 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 TARSL2A2RTX5 802 aaKnown RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 FAM170BA6NMN3 283 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 K7ERQ8 282 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 SMAD6O43541 496 aaKnown RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 RNF40O75150 1001 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 ECEL1O95672 775 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 IGSF6O95976 241 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 GAS8O95995 478 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 IL12RB1P42701 662 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 MAGEA9P43362 315 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 RECQLP46063 649 aaPredicted RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 KCNJ1P48048 391 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 CSNK1DP48730 415 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 RHOAP61586 193 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 SNRPD1P62314 119 aaKnown RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 ZBTB17Q13105 803 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 DHX34Q14147 1143 aaKnown RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 P3H1Q32P28 736 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 HNRNPA1L2Q32P51 320 aaKnown RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 ANKRD20A2Q5SQ80 823 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 ANKRD20A1Q5TYW2 823 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 EMC10Q5UCC4 262 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 ANKRD20A3Q5VUR7 823 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 ALG1LQ6GMV1 187 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 ITPRIPL1Q6GPH6 555 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 TRIM67Q6ZTA4 783 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 SYDE1Q6ZW31 735 aaPredicted RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 CHPFQ8IZ52 775 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 ZNF567Q8N184 647 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 CCDC89Q8N998 374 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 IL17RCQ8NAC3 791 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 TSEN2Q8NCE0 465 aaKnown RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 LRRN4CLQ8ND94 238 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 PJA1Q8NG27 643 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 OR2AP1Q8NGE2 309 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 FRS2Q8WU20 508 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 CLDN23Q96B33 292 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 GDAP1L1Q96MZ0 367 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 SPATA13Q96N96 652 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 PPP1R2P1Q96PQ5 205 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 GABRG3Q99928 467 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 IER2Q9BTL4 223 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 POLR1EQ9GZS1 481 aaKnown RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 DDX47Q9H0S4 455 aaKnown RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 MFSD1Q9H3U5 465 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 C10orf88Q9H8K7 445 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 FBRSQ9HAH7 460 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 LMAN1LQ9HAT1 526 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 PCDH9Q9HC56 1237 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 NT5MQ9NPB1 228 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 KLHL8Q9P2G9 620 aaPredicted RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 LHX3Q9UBR4 397 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 FCF1Q9Y324 198 aaKnown RBP11.84□□□□□ -0.51
CDRT1-207ENST00000583965 ACTL7AQ9Y615 435 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 STON1Q9Y6Q2 735 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 PLXND1Q9Y4D7 1925 aa11.84□□□□□ -0.51
CDRT1-207ENST00000583965 MUC3AQ02505 3323 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 TTC34A8MYJ7 566 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 CHURC1-FNTBB4DL54 471 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 STK25O00506 426 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 ALOX15BO15296 676 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 ATG13O75143 517 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 ZNF821O75541 412 aaPredicted RBP11.83□□□□□ -0.52
CDRT1-207ENST00000583965 KLF8O95600 359 aaPredicted RBP11.83□□□□□ -0.52
CDRT1-207ENST00000583965 IFNB1P01574 187 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 HLA-DQB2P05538 268 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 MAPK8P45983 427 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 RPS9P46781 194 aaKnown RBP11.83□□□□□ -0.52
CDRT1-207ENST00000583965 GDF10P55107 478 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 DR1Q01658 176 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 RAD51Q06609 339 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 C2orf54Q08AI8 447 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 GRM3Q14832 879 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 SLC14A2Q15849 920 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 C2orf27AQ580R0 203 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 CARD16Q5EG05 197 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 EOGTQ5NDL2 527 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 ARHGEF18Q6ZSZ5 1173 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 Q6ZVU0 165 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 PID1Q7Z2X4 250 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 MAATS1Q7Z4T9 603 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 KLHL7Q8IXQ5 586 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 PGBD5Q8N414 524 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 CNTD1Q8N815 330 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 RPLP0P6Q8NHW5 317 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 CCHCR1Q8TD31 782 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 PTPRN2Q92932 1015 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 ZNF419Q96HQ0 510 aaPredicted RBP11.83□□□□□ -0.52
CDRT1-207ENST00000583965 AGAP3Q96P47 875 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms