RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 LIASO43766 372 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 DDNO94850 711 aaPredicted RBP4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 GLP2RO95838 553 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 PRSS2P07478 247 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 CYP3A4P08684 503 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 CYP3A7P24462 503 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 AKT1P31749 480 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 ERVFC1-1P60608 527 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 ZP1P60852 638 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 RHAGQ02094 409 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 NUCB1Q02818 461 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 RNASELQ05823 741 aaKnown RBP4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 DHX8Q14562 1220 aaKnown RBP4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 DUSP6Q16828 381 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 ARHGAP31Q2M1Z3 1444 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 C9orf57Q5W0N0 161 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 ARL6IP4Q66PJ3 421 aaKnown RBP4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 ERAP2Q6P179 960 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 ATF7IPQ6VMQ6 1270 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 ARMC9Q7Z3E5 817 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 KLBQ86Z14 1044 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 BRI3BPQ8WY22 251 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 ARHGAP45Q92619 1136 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 MECRQ9BV79 373 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 SARGQ9BW04 601 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 SORBS1Q9BX66 1292 aaKnown RBP4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 CHMP4BQ9H444 224 aaKnown RBP4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 NECTIN3Q9NQS3 549 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 BCCIPQ9P287 314 aaKnown RBP eCLIP4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 ZBTB1Q9Y2K1 713 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 COPG1Q9Y678 874 aaKnown RBP4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 ABCA6Q8N139 1617 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 KIF16BQ96L93 1317 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 KIF1BO60333 1816 aa4.42□□□□□ -1.7
SMCHD1-208ENST00000583344 ZFYVE16Q7Z3T8 1539 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 ADGRB2O60241 1585 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TBC1D3DA0A087WVF3 549 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TBC1D3IA0A087WXS9 549 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TBC1D3EA0A087X179 549 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TBC1D3KA0A087X1G2 549 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 CCDC189A1A4V9 331 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TBC1D3BA6NDS4 549 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TBC1D3FA6NER0 549 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 SMTNL1A8MU46 457 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 BTBD18B2RXH4 712 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 ERVV-2B6SEH9 535 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TBC1D3LB9A6J9 549 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 ZBTB11O95625 1053 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 IFIT2P09913 472 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TBC1D3HP0C7X1 549 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 ITGB8P26012 769 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 KLRC2P26717 231 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TMPOP42166 694 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 STAT1P42224 750 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TERF1P54274 439 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 ALDH18A1P54886 795 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 KIF5AQ12840 1032 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 COASYQ13057 564 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 SAFBQ15424 915 aaKnown RBP eCLIP4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 MPEG1Q2M385 716 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 FAM76BQ5HYJ3 339 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TBC1D3GQ6DHY5 549 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TBC1D3CQ6IPX1 549 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 RINT1Q6NUQ1 792 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TMEM71Q6P5X7 295 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 AAGABQ6PD74 315 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 GSG1LQ6UXU4 331 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 ZNF367Q7RTV3 350 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 C16orf82Q7Z2V1 217 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 C11orf96Q7Z7L8 435 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TMPRSS12Q86WS5 348 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 CAMK1DQ8IU85 385 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TBC1D3Q8IZP1 549 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 GCC1Q96CN9 775 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 RIPOR3Q96MK2 946 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 ARPC5LQ9BPX5 153 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 ZNF700Q9H0M5 742 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 GRPEL1Q9HAV7 217 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 ARL15Q9NXU5 204 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 IGSF9Q9P2J2 1179 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 TNNQ9UQP3 1299 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 DTX4Q9Y2E6 619 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 CEP83Q9Y592 693 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 PCDHGB2Q9Y5G2 931 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 MED14O60244 1454 aa4.41□□□□□ -1.7
SMCHD1-208ENST00000583344 PNPLA6Q8IY17 1366 aa4.4□□□□□ -1.7
SMCHD1-208ENST00000583344 ANKRD36BQ8N2N9 1353 aa4.4□□□□□ -1.7
SMCHD1-208ENST00000583344 IBTKQ9P2D0 1353 aaPredicted RBP4.4□□□□□ -1.7
SMCHD1-208ENST00000583344 ADGRB1O14514 1584 aa4.4□□□□□ -1.7
SMCHD1-208ENST00000583344 GLI2P10070 1586 aa4.4□□□□□ -1.7
SMCHD1-208ENST00000583344 INO80Q9ULG1 1556 aaPredicted RBP4.4□□□□□ -1.7
SMCHD1-208ENST00000583344 NOS1P29475 1434 aa4.4□□□□□ -1.7
SMCHD1-208ENST00000583344 NSD3Q9BZ95 1437 aa4.4□□□□□ -1.7
SMCHD1-208ENST00000583344 ZCCHC11Q5TAX3 1644 aaKnown RBP4.4□□□□□ -1.7
SMCHD1-208ENST00000583344 MROH1Q8NDA8 1641 aa4.4□□□□□ -1.7
SMCHD1-208ENST00000583344 TCRBV7S3A2A0A539 114 aa4.4□□□□□ -1.71
SMCHD1-208ENST00000583344 STMND1H3BQB6 276 aa4.4□□□□□ -1.71
SMCHD1-208ENST00000583344 IFRD1O00458 451 aaPredicted RBP4.4□□□□□ -1.71
SMCHD1-208ENST00000583344 PIP5K1BO14986 540 aa4.4□□□□□ -1.71
SMCHD1-208ENST00000583344 LINC01565O15544 149 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms