RNA–Protein interactions for RNA: ENST00000582565.1

NCOR1-222, Transcript of nuclear receptor corepressor 1, human

TSL 4

Gene NCOR1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-222	ENST00000582565	SIPA1	Q96FS4	1042 aa		10.84	□□□□□ -0.67
NCOR1-222	ENST00000582565	ZDHHC5	Q9C0B5	715 aa		10.84	□□□□□ -0.67
NCOR1-222	ENST00000582565	MMRN2	Q9H8L6	949 aa		10.84	□□□□□ -0.67
NCOR1-222	ENST00000582565	EIF2B4	Q9UI10	523 aa	Known RBP	10.84	□□□□□ -0.67
NCOR1-222	ENST00000582565	HPSE	Q9Y251	543 aa		10.84	□□□□□ -0.67
NCOR1-222	ENST00000582565	ZNF510	Q9Y2H8	683 aa		10.84	□□□□□ -0.67
NCOR1-222	ENST00000582565	FRMD4B	Q9Y2L6	1034 aa		10.84	□□□□□ -0.67
NCOR1-222	ENST00000582565	SSU72P8	A0A1W2PR75	194 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	SLC12A8	A0AV02	714 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	CALU	O43852	315 aa	Predicted RBP	10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	RALA	P11233	206 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	NR2F2	P24468	414 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	HOXD9	P28356	352 aa	Predicted RBP	10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	RDX	P35241	583 aa	Known RBP	10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	CHKA	P35790	457 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	ZNF132	P52740	706 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	RAD23B	P54727	409 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	PCBP3	P57721	371 aa	Known RBP	10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	SERINC3	Q13530	473 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	NFIL3	Q16649	462 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	HLA-B	Q31612	363 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	PM20D1	Q6GTS8	502 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	CRTC3	Q6UUV7	619 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	ANKS1B	Q7Z6G8	1248 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	CPXM2	Q8N436	756 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	PRCC	Q92733	491 aa	Predicted RBP	10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	SNX21	Q969T3	373 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	PPP1R14A	Q96A00	147 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	UBXN6	Q9BZV1	441 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	DCLK3	Q9C098	648 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	GAREM1	Q9H706	876 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	CISH	Q9NSE2	258 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	MARCH2	Q9P0N8	246 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	APEX2	Q9UBZ4	518 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	BTBD3	Q9Y2F9	522 aa		10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565	SF3B6	Q9Y3B4	125 aa	Known RBP	10.83	□□□□□ -0.68
NCOR1-222	ENST00000582565		A0A1B0GVT2	93 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	NPC1	O15118	1278 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	BCAT2	O15382	392 aa	Predicted RBP	10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	SYNCRIP	O60506	623 aa	Known RBP	10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	RHOBTB3	O94955	611 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	GSN	P06396	782 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	ATXN1L	P0C7T5	689 aa	Known RBP	10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	ZNF883	P0CG24	379 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	CMA1	P23946	247 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	HLA-F	P30511	346 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	OXTR	P30559	389 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	ACSL1	P33121	698 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	CTSK	P43235	329 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	CSNK1E	P49674	416 aa	Known RBP	10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	SGSH	P51688	502 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	GP2	P55259	537 aa	Known RBP	10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	YWHAG	P61981	247 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	KIF19	Q2TAC6	998 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	ZCWPW2	Q504Y3	356 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	SOWAHC	Q53LP3	525 aa	Predicted RBP	10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	KCNT1	Q5JUK3	1230 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	ARHGAP17	Q68EM7	881 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	ATL3	Q6DD88	541 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	RNF111	Q6ZNA4	994 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	INTS8	Q75QN2	995 aa	Known RBP	10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	TADA2B	Q86TJ2	420 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	ADIPOR2	Q86V24	386 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	FAM124A	Q86V42	546 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	FAM186B	Q8IYM0	893 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565		Q8N3U1	123 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	ZNF366	Q8N895	744 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	MDM1	Q8TC05	714 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	SETD7	Q8WTS6	366 aa	Known RBP	10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	UCMA	Q8WVF2	138 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	EEF2KMT	Q96G04	330 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	TMEM176A	Q96HP8	235 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	CDK5RAP1	Q96SZ6	601 aa	Known RBP	10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	ORAI3	Q9BRQ5	295 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	NUP58	Q9BVL2	599 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	SLC2A11	Q9BYW1	496 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	ULBP1	Q9BZM6	244 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	CIPC	Q9C0C6	399 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	TMEM245	Q9H330	911 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	C6orf106	Q9H6K1	298 aa	Predicted RBP	10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	TMEM8A	Q9HCN3	771 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	TM7SF3	Q9NS93	570 aa		10.82	□□□□□ -0.68
NCOR1-222	ENST00000582565	TP53BP1	Q12888	1972 aa	Predicted RBP	10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	ARID1B	Q8NFD5	2236 aa	Predicted RBP	10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	FAM237A	A0A1B0GTK4	181 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565		H0Y8X5	98 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	KCNK3	O14649	394 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	TSPAN3	O60637	253 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	PSMC2	P35998	433 aa	Known RBP	10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	MATK	P42679	507 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	TKTL1	P51854	596 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	NDUFA8	P51970	172 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	ENPEP	Q07075	957 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	ADAM9	Q13443	819 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	ACAP1	Q15027	740 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	EIF4H	Q15056	248 aa	Known RBP	10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	COL28A1	Q2UY09	1125 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	LAYN	Q6UX15	382 aa		10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	10.81	□□□□□ -0.68
NCOR1-222	ENST00000582565	ANKRD52	Q8NB46	1076 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms