RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 ACADSBP45954 432 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 GPR15P49685 360 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 BCAT1P54687 386 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 RNASE9P60153 205 aaKnown RBP10.58□□□□□ -0.72
SS18-221ENST00000582448 BST2Q10589 180 aaKnown RBP10.58□□□□□ -0.72
SS18-221ENST00000582448 PTP4A2Q12974 167 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 DMC1Q14565 340 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 BRD3Q15059 726 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 HADHQ16836 314 aaKnown RBP10.58□□□□□ -0.72
SS18-221ENST00000582448 C2CD6Q53TS8 623 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 SDHAF4Q5VUM1 108 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 KIAA1211LQ6NV74 962 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 CBLL1Q75N03 491 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 LRRTM3Q86VH5 581 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 WDTC1Q8N5D0 677 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 ANKRD52Q8NB46 1076 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 CCDC26Q8TAB7 109 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 UBA3Q8TBC4 463 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 MRPS31Q92665 395 aaKnown RBP10.58□□□□□ -0.72
SS18-221ENST00000582448 USP13Q92995 863 aaPredicted RBP10.58□□□□□ -0.72
SS18-221ENST00000582448 MS4A14Q96JA4 679 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 NCAPGQ9BPX3 1015 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 MED10Q9BTT4 135 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 ZCWPW1Q9H0M4 648 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 TRPC7Q9HCX4 862 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 FAM49BQ9NUQ9 324 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 TDP1Q9NUW8 608 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 GREB1Q4ZG55 1949 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 PATE3B3GLJ2 98 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 RNF8O76064 485 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 HAPLN1P10915 354 aaPredicted RBP10.57□□□□□ -0.72
SS18-221ENST00000582448 CD8BP10966 210 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 PSMA2P25787 234 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 ADORA2BP29275 332 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 GJA4P35212 333 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 GABRB2P47870 512 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 GSCP56915 257 aaPredicted RBP10.57□□□□□ -0.72
SS18-221ENST00000582448 ACAP1Q15027 740 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 PTPN20Q4JDL3 420 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 USP39Q53GS9 565 aaKnown RBP10.57□□□□□ -0.72
SS18-221ENST00000582448 FAM102AQ5T9C2 384 aaPredicted RBP10.57□□□□□ -0.72
SS18-221ENST00000582448 OR6B2Q6IFH4 312 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 LIMS2Q7Z4I7 341 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 MAATS1Q7Z4T9 603 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 CCDC50Q8IVM0 306 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 C12orf29Q8N999 325 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 NOA1Q8NC60 698 aaKnown RBP10.57□□□□□ -0.72
SS18-221ENST00000582448 B3GALNT2Q8NCR0 500 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 DEFB124Q8NES8 71 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 RIN3Q8TB24 985 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 KBTBD7Q8WVZ9 684 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 PIGKQ92643 395 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 CD101Q93033 1021 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 EXOC4Q96A65 974 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 MISP3Q96FF7 219 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 RBM41Q96IZ5 413 aaKnown RBP10.57□□□□□ -0.72
SS18-221ENST00000582448 RUNDC3BQ96NL0 473 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 CPXM1Q96SM3 734 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 SCNM1Q9BWG6 230 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 PARD6BQ9BYG5 372 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 TNKS2Q9H2K2 1166 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 ECT2Q9H8V3 914 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 ARFGAP3Q9NP61 516 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 TMEM9BQ9NQ34 198 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 ASNSD1Q9NWL6 643 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 DUS2Q9NX74 493 aaKnown RBP10.57□□□□□ -0.72
SS18-221ENST00000582448 DDX43Q9NXZ2 648 aaKnown RBP10.57□□□□□ -0.72
SS18-221ENST00000582448 DDX56Q9NY93 547 aaKnown RBP10.57□□□□□ -0.72
SS18-221ENST00000582448 CHD8Q9HCK8 2581 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 CITO14578 2027 aa10.57□□□□□ -0.72
SS18-221ENST00000582448 LNP1A1A4G5 178 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 CCDC151A5D8V7 595 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 ZRANB2O95218 330 aaKnown RBP eCLIP10.56□□□□□ -0.72
SS18-221ENST00000582448 ERBB2P04626 1255 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 KRT7P08729 469 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 PTPN1P18031 435 aaKnown RBP10.56□□□□□ -0.72
SS18-221ENST00000582448 IFNAR2P48551 515 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 DHPSP49366 369 aaPredicted RBP10.56□□□□□ -0.72
SS18-221ENST00000582448 PEX5P50542 639 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 IRX4P78413 519 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 PDGFRLQ15198 375 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 MAPRE1Q15691 268 aaKnown RBP10.56□□□□□ -0.72
SS18-221ENST00000582448 FBXO43Q4G163 708 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 C2orf27AQ580R0 203 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 LRRC38Q5VT99 294 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 WSCD1Q658N2 575 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 WDR93Q6P2C0 686 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 SYT13Q7L8C5 426 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 TMEM150AQ86TG1 271 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 XYLT1Q86Y38 959 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 HID1Q8IV36 788 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 KLHL7Q8IXQ5 586 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 IFT20Q8IY31 132 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 DCP1BQ8IZD4 617 aaKnown RBP10.56□□□□□ -0.72
SS18-221ENST00000582448 CPA6Q8N4T0 437 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 NIPA2Q8N8Q9 360 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 TSTD1Q8NFU3 115 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 SPPL2BQ8TCT7 592 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 SLC2A14Q8TDB8 520 aa10.56□□□□□ -0.72
SS18-221ENST00000582448 FNIP1Q8TF40 1166 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms