RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 RWDD4Q6NW29 188 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 NEK5Q6P3R8 708 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 Q6ZSR6 202 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 PARS2Q7L3T8 475 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 RYBPQ8N488 228 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 MSANTD4Q8NCY6 345 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 SLC30A5Q8TAD4 765 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 PPP1R16AQ96I34 528 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 HAPLN3Q96S86 360 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 HEPHQ9BQS7 1158 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 C11orf70Q9BRQ4 267 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 HDAC8Q9BY41 377 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 STK33Q9BYT3 514 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 NUP62CLQ9H1M0 184 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 VPS16Q9H269 839 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 KLHL11Q9NVR0 708 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 DNAJC28Q9NX36 388 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 DNAI1Q9UI46 699 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 CLCA2Q9UQC9 943 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 ITM2BQ9Y287 266 aa11.86□□□□□ -0.51
CDK5RAP3-223ENST00000582114 POM121BA6NF01 834 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 EIF4E1BA6NMX2 242 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 BRINP1O60477 761 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 ERCC5P28715 1186 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 EIF2S3P41091 472 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 ILKQ13418 452 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 CCDC14Q49A88 953 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 TMEM259Q4ZIN3 620 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 CARD16Q5EG05 197 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 LRRC73Q5JTD7 316 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 RETSATQ6NUM9 610 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 LRRC69Q6ZNQ3 347 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 BNIPLQ7Z465 357 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 PCDH20Q8N6Y1 951 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 NETO2Q8NC67 525 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 OR4C6Q8NH72 309 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 JOSD2Q8TAC2 188 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 GPT2Q8TD30 523 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 RXFP2Q8WXD0 754 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 BMFQ96LC9 184 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 SLC17A9Q9BYT1 436 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 CEP44Q9C0F1 390 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 OSBPL2Q9H1P3 480 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 GANQ9H2C0 597 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 NLRC4Q9NPP4 1024 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 CHMP5Q9NZZ3 219 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 HECAQ9UBI9 543 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 OR12D3Q9UGF7 316 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 DACH1Q9UI36 760 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 GGT7Q9UJ14 662 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 PCDHB1Q9Y5F3 818 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 RAI2Q9Y5P3 530 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 FADS3Q9Y5Q0 445 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 TRPM6Q9BX84 2022 aa11.85□□□□□ -0.51
CDK5RAP3-223ENST00000582114 IGLON5A6NGN9 336 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 A6NNZ2 444 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 FAM72CH0Y354 149 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 NEMP1O14524 444 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 EPHB6O15197 1021 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 CD160O95971 181 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 MT-CO3P00414 261 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 PRB1P04280 392 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 GIMD1P0DJR0 217 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 CHRNB2P17787 502 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 ITGB7P26010 798 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 L1CAMP32004 1257 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 ABL2P42684 1182 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 POLR2FP61218 127 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 RPS21P63220 83 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 FMO1Q01740 532 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 CCDC173Q0VFZ6 552 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 RTP5Q14D33 572 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 FAM72AQ5TYM5 149 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 FAM72DQ6L9T8 149 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 ZNF783Q6ZMS7 281 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 ABI3BPQ7Z7G0 1075 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 FAM72BQ86X60 149 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 ZNF354CQ86Y25 554 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 CCDC185Q8N715 623 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 NAF1Q96HR8 494 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 FEM1CQ96JP0 617 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 APOLD1Q96LR9 279 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 NRSN2Q9GZP1 204 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 FAM207AQ9NSI2 230 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 PPARGC1AQ9UBK2 798 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 NOCTQ9UK39 431 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 IGSF10Q6WRI0 2623 aa11.84□□□□□ -0.51
CDK5RAP3-223ENST00000582114 C16orf96A6NNT2 1141 aa11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 KRIT1O00522 736 aa11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 RRP8O43159 456 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 UGT2B4P06133 528 aa11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 ALPPL2P10696 532 aa11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 SDC4P31431 198 aa11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 ADRA1BP35368 520 aa11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 E2F1Q01094 437 aa11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CDR2Q01850 454 aa11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 SLC20A2Q08357 652 aa11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 SGCGQ13326 291 aa11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 FZD2Q14332 565 aa11.83□□□□□ -0.52
CDK5RAP3-223ENST00000582114 KRT31Q15323 416 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms