RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 OR14C36Q8NHC7 312 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 PIP4K2CQ8TBX8 421 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 ARHGEF2Q92974 986 aaKnown RBP9.92□□□□□ -0.82
TOP3A-211ENST00000581536 ITPKCQ96DU7 683 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 PPP1R9BQ96SB3 815 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 ACE2Q9BYF1 805 aaPredicted RBP9.92□□□□□ -0.82
TOP3A-211ENST00000581536 KLC2Q9H0B6 622 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 TM9SF3Q9HD45 589 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 GPATCH2LQ9NWQ4 482 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 MYO1AQ9UBC5 1043 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 PCSK1NQ9UHG2 260 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 ADAMTS1Q9UHI8 967 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 PPM1HQ9ULR3 514 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 FZD10Q9ULW2 581 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 SCML1Q9UN30 329 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 WDFY3Q8IZQ1 3526 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 FRYQ5TBA9 3013 aa9.92□□□□□ -0.82
TOP3A-211ENST00000581536 TBC1D3DA0A087WVF3 549 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 TBC1D3IA0A087WXS9 549 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 TBC1D3EA0A087X179 549 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 TBC1D3KA0A087X1G2 549 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 TBC1D3FA6NER0 549 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-211ENST00000581536 TMEM191CA6NGB0 347 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 C10orf142B7Z368 130 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 TBC1D3LB9A6J9 549 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 CREB3O43889 395 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 GJB3O75712 270 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 WNT1P04628 370 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 SYPP08247 313 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 TBC1D3HP0C7X1 549 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 GZMAP12544 262 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 RHOQP17081 205 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 GKP32189 559 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 CHRNA3P32297 505 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 DPP6P42658 865 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 NOVA1P51513 510 aaKnown RBP9.91□□□□□ -0.82
TOP3A-211ENST00000581536 ATXN3P54252 364 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-211ENST00000581536 ADPRHP54922 357 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 PPP2CBP62714 309 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 PPP2CAP67775 309 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 NRG1Q02297 640 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-211ENST00000581536 ELAVL3Q14576 367 aaKnown RBP9.91□□□□□ -0.82
TOP3A-211ENST00000581536 CA9Q16790 459 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 HLA-BQ31612 363 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 TTC31Q49AM3 519 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-211ENST00000581536 C6orf118Q5T5N4 469 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 TBC1D3GQ6DHY5 549 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 TBC1D3CQ6IPX1 549 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 PLEKHA7Q6IQ23 1121 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 PIP4P1Q86T03 277 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 TBC1D3Q8IZP1 549 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-211ENST00000581536 OR8D1Q8WZ84 308 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 KLK6Q92876 244 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 ARRDC3Q96B67 414 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 VCPIP1Q96JH7 1222 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 PEBP4Q96S96 227 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 CNPY3Q9BT09 278 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 C2orf49Q9BVC5 232 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-211ENST00000581536 EDEM3Q9BZQ6 932 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 NOL6Q9H6R4 1146 aaKnown RBP9.91□□□□□ -0.82
TOP3A-211ENST00000581536 GAREM1Q9H706 876 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 ATP13A1Q9HD20 1204 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 ARHGAP20Q9P2F6 1191 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 CNOT8Q9UFF9 292 aaKnown RBP9.91□□□□□ -0.82
TOP3A-211ENST00000581536 HS3ST2Q9Y278 367 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 SNX11Q9Y5W9 270 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 AKAP13Q12802 2813 aa9.91□□□□□ -0.82
TOP3A-211ENST00000581536 PTPRBP23467 1997 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 PLXNB3Q9ULL4 1909 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 SPAARA0A1B0GVQ0 90 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 GOLGA6L19H0YKK7 550 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 SH3BP5O60239 455 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 OPHN1O60890 802 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 CD27P26842 260 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 MAT2AP31153 395 aaKnown RBP9.9□□□□□ -0.82
TOP3A-211ENST00000581536 L1CAMP32004 1257 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 DNA2P51530 1060 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 TAS2R38P59533 333 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 POLD3Q15054 466 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-211ENST00000581536 KIF19Q2TAC6 998 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 FIGNQ5HY92 759 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 ACBD5Q5T8D3 534 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-211ENST00000581536 LRSAM1Q6UWE0 723 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 DPY19L3Q6ZPD9 716 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 TMC6Q7Z403 805 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 RABEPKQ7Z6M1 372 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 DCAF4L2Q8NA75 395 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 OR2T34Q8NGX1 318 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 NTAN1Q96AB6 310 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 VOPP1Q96AW1 172 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 TBC1D31Q96DN5 1066 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 BTBD6Q96KE9 485 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 SLC6A18Q96N87 628 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.9□□□□□ -0.82
TOP3A-211ENST00000581536 XPO4Q9C0E2 1151 aaKnown RBP9.9□□□□□ -0.82
TOP3A-211ENST00000581536 ISCUQ9H1K1 167 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 PCED1AQ9H1Q7 454 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 CAAP1Q9H8G2 361 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 PARVAQ9NVD7 372 aa9.9□□□□□ -0.82
TOP3A-211ENST00000581536 DNAAF2Q9NVR5 837 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms