RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ERN2Q76MJ5 926 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 HID1Q8IV36 788 aa14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 OR52K2Q8NGK3 314 aa14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 TSACCQ96A04 125 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 TAAR9Q96RI9 348 aa14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 EPAS1Q99814 870 aa14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 NUDT22Q9BRQ3 303 aa14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 CDH19Q9H159 772 aa14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 RRN3Q9NYV6 651 aa14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 TLK1Q9UKI8 766 aa14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 ITM2BQ9Y287 266 aa14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 NIPBLQ6KC79 2804 aaeCLIP14.37□□□□□ -0.11
CSNK1D-213ENST00000580446 HNRNPRO43390 633 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 EPB41L2O43491 1005 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 ENDOD1O94919 500 aa14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 MT-CO1P00395 513 aa14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 FURINP09958 794 aa14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 LCP1P13796 627 aa14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 CHRNA3P32297 505 aa14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 KCTD16Q68DU8 428 aa14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 TIPARPQ7Z3E1 657 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 FCRL2Q96LA5 508 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 CCDC74BQ96LY2 380 aa14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 IPO9Q96P70 1041 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 CTRCQ99895 268 aa14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 DYRK4Q9NR20 520 aa14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 ANKHD1Q8IWZ3 2542 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-213ENST00000580446 SHANK1Q9Y566 2161 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 KRT86O43790 486 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 ATP9BO43861 1147 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 ASS1P00966 412 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 TCN2P20062 427 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 LONP1P36776 959 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 PIK3CAP42336 1068 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 INPP5JQ15735 1006 aaPredicted RBP14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 SGSM1Q2NKQ1 1148 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 GOLGA7BQ2TAP0 167 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 ARSIQ5FYB1 569 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 RRAGBQ5VZM2 374 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 ANKS6Q68DC2 871 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 VPS36Q86VN1 386 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 CHSY1Q86X52 802 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 UNC45BQ8IWX7 931 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 KIAA1143Q96AT1 154 aaPredicted RBP14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 LLPHQ9BRT6 129 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 TNKS2Q9H2K2 1166 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 LRRC4Q9HBW1 653 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 STK17AQ9UEE5 414 aa14.35□□□□□ -0.11
CSNK1D-213ENST00000580446 TACC2O95359 2948 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 ALOX15BO15296 676 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 EXOC3O60645 756 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 HLA-DRAP01903 254 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 TRIM21P19474 475 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 IGFALSP35858 605 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 IRAK1P51617 712 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 OR1D5P58170 312 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 RPS21P63220 83 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 HMGN5P82970 282 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 PPARDQ03181 441 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 SGCGQ13326 291 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 ZXDCQ2QGD7 858 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 XYLT1Q86Y38 959 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 NRSN1Q8IZ57 195 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 OR2A12Q8NGT7 310 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 CLEC4CQ8WTT0 213 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 ERCC4Q92889 916 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 C19orf60Q96EN9 201 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 C5orf34Q96MH7 638 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 OCIAD1Q9NX40 245 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 SLC39A1Q9NY26 324 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 AKAP7Q9P0M2 348 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 SLC25A13Q9UJS0 675 aa14.34□□□□□ -0.11
CSNK1D-213ENST00000580446 B4DGG1 531 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 B4GAT1O43505 415 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 CTSEP14091 401 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 HOXB4P17483 251 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 TACR2P21452 398 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 F8A1P23610 371 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 RRM1P23921 792 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 RECQLP46063 649 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 RGS7P49802 495 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 CENPCQ03188 943 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 NR6A1Q15406 480 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 ALG11Q2TAA5 492 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 CERCAMQ5T4B2 595 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 CXorf57Q6NSI4 855 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 FAM129CQ86XR2 697 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 CCAR2Q8N163 923 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 SIX6OS1Q8N1H7 587 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 SH2D3CQ8N5H7 860 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 UBA3Q8TBC4 463 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 FAM174AQ8TBP5 190 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 PARD3BQ8TEW8 1205 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 SCG3Q8WXD2 468 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 MFRPQ9BY79 579 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 MBNL1Q9NR56 388 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 ABCC13Q9NSE7 274 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 LRIT1Q9P2V4 623 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 PILRAQ9UKJ1 303 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 PCDHGA3Q9Y5H0 932 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms