RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 H0Y858 1186 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 CHRNA3P32297 505 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 CSNK1DP48730 415 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 DNA2P51530 1060 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 PTPN5P54829 565 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 SNRPD1P62314 119 aaKnown RBP23.1■■□□□ 1.29
NDEL1-207ENST00000580012 LBRQ14739 615 aaKnown RBP23.1■■□□□ 1.29
NDEL1-207ENST00000580012 MYLK3Q32MK0 819 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 MAP7D1Q3KQU3 841 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 ZNF776Q68DI1 518 aaPredicted RBP23.1■■□□□ 1.29
NDEL1-207ENST00000580012 HEATR6Q6AI08 1181 aaKnown RBP23.1■■□□□ 1.29
NDEL1-207ENST00000580012 TIGD7Q6NT04 549 aaPredicted RBP23.1■■□□□ 1.29
NDEL1-207ENST00000580012 CHST14Q8NCH0 376 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 TMIEQ8NEW7 156 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 PRCCQ92733 491 aaPredicted RBP23.1■■□□□ 1.29
NDEL1-207ENST00000580012 P3H4Q92791 437 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 CCDC114Q96M63 670 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 USP36Q9P275 1121 aaKnown RBP23.1■■□□□ 1.29
NDEL1-207ENST00000580012 HECAQ9UBI9 543 aaPredicted RBP23.1■■□□□ 1.29
NDEL1-207ENST00000580012 SEPT3Q9UH03 358 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 PCDHGA2Q9Y5H1 932 aa23.1■■□□□ 1.29
NDEL1-207ENST00000580012 POP4O95707 220 aaKnown RBP23.09■■□□□ 1.29
NDEL1-207ENST00000580012 IGLV3-19P01714 112 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 CTSLP07711 333 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 RHOAP61586 193 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 XRCC4Q13426 336 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 MMAAQ8IVH4 418 aaKnown RBP23.09■■□□□ 1.29
NDEL1-207ENST00000580012 CCDC13Q8IYE1 715 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 TSEN2Q8NCE0 465 aaKnown RBP23.09■■□□□ 1.29
NDEL1-207ENST00000580012 LRRN4Q8WUT4 740 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 ZNF419Q96HQ0 510 aaPredicted RBP23.09■■□□□ 1.29
NDEL1-207ENST00000580012 HEPHQ9BQS7 1158 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 TM6SF2Q9BZW4 377 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 IRF2BPLQ9H1B7 796 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 BCCIPQ9P287 314 aaKnown RBP eCLIP23.09■■□□□ 1.29
NDEL1-207ENST00000580012 SARDHQ9UL12 918 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 SCML1Q9UN30 329 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 FARP1Q9Y4F1 1045 aaPredicted RBP23.09■■□□□ 1.29
NDEL1-207ENST00000580012 WASF2Q9Y6W5 498 aa23.09■■□□□ 1.29
NDEL1-207ENST00000580012 KCNK3O14649 394 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 PPP1R12AO14974 1030 aaPredicted RBP23.08■■□□□ 1.29
NDEL1-207ENST00000580012 MUSKO15146 869 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 HRO43593 1189 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 RNASEH1O60930 286 aaKnown RBP23.08■■□□□ 1.29
NDEL1-207ENST00000580012 CNR2P34972 360 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 RECQLP46063 649 aaPredicted RBP23.08■■□□□ 1.29
NDEL1-207ENST00000580012 RENBPP51606 427 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 CCNHP51946 323 aaPredicted RBP23.08■■□□□ 1.29
NDEL1-207ENST00000580012 PRKD1Q15139 912 aaPredicted RBP23.08■■□□□ 1.29
NDEL1-207ENST00000580012 NOMO1Q15155 1222 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 CST6Q15828 149 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 ATXN7L2Q5T6C5 722 aaPredicted RBP23.08■■□□□ 1.29
NDEL1-207ENST00000580012 MARC1Q5VT66 337 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 DSG4Q86SJ6 1040 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 PGBD3Q8N328 593 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 PGBD5Q8N414 524 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 CCNYQ8ND76 341 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 LRIG1Q96JA1 1093 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 GDAP1L1Q96MZ0 367 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 TPSD1Q9BZJ3 242 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 PABPC3Q9H361 631 aaKnown RBP23.08■■□□□ 1.29
NDEL1-207ENST00000580012 AMACRQ9UHK6 382 aa23.08■■□□□ 1.29
NDEL1-207ENST00000580012 CKAP5Q14008 2032 aa23.08■■□□□ 1.28
NDEL1-207ENST00000580012 TCRBV7S2A1N4TA0A589 114 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 RNF103O00237 685 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 ENC1O14682 589 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 ZNF217O75362 1048 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 CCNB1P14635 433 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 CR2P20023 1033 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 C5AR1P21730 350 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 MSNP26038 577 aaKnown RBP23.07■■□□□ 1.28
NDEL1-207ENST00000580012 SLC8A1P32418 973 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 HSPA9P38646 679 aaKnown RBP23.07■■□□□ 1.28
NDEL1-207ENST00000580012 P2RY2P41231 377 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 RGRP47804 291 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 IFI35P80217 286 aaPredicted RBP23.07■■□□□ 1.28
NDEL1-207ENST00000580012 USP39Q53GS9 565 aaKnown RBP23.07■■□□□ 1.28
NDEL1-207ENST00000580012 KIAA1324Q6UXG2 1013 aaKnown RBP23.07■■□□□ 1.28
NDEL1-207ENST00000580012 SLC13A5Q86YT5 568 aaPredicted RBP23.07■■□□□ 1.28
NDEL1-207ENST00000580012 ACTL9Q8TC94 416 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 NSMCE1Q8WV22 266 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 FAM131CQ96AQ9 280 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 PHOX2BQ99453 314 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 IL12RB2Q99665 862 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 MGME1Q9BQP7 344 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 CINPQ9BW66 212 aaPredicted RBP23.07■■□□□ 1.28
NDEL1-207ENST00000580012 CPEB1Q9BZB8 566 aaKnown RBP23.07■■□□□ 1.28
NDEL1-207ENST00000580012 IL36AQ9UHA7 158 aa23.07■■□□□ 1.28
NDEL1-207ENST00000580012 HACD1B0YJ81 288 aa23.06■■□□□ 1.28
NDEL1-207ENST00000580012 BNIP3LO60238 219 aa23.06■■□□□ 1.28
NDEL1-207ENST00000580012 IGSF6O95976 241 aa23.06■■□□□ 1.28
NDEL1-207ENST00000580012 ADH1BP00325 375 aa23.06■■□□□ 1.28
NDEL1-207ENST00000580012 PRNPP04156 253 aa23.06■■□□□ 1.28
NDEL1-207ENST00000580012 MMP13P45452 471 aa23.06■■□□□ 1.28
NDEL1-207ENST00000580012 TPMTP51580 245 aa23.06■■□□□ 1.28
NDEL1-207ENST00000580012 OTUD4Q01804 1114 aaKnown RBP23.06■■□□□ 1.28
NDEL1-207ENST00000580012 ARSIQ5FYB1 569 aa23.06■■□□□ 1.28
NDEL1-207ENST00000580012 FAM46CQ5VWP2 391 aa23.06■■□□□ 1.28
NDEL1-207ENST00000580012 USP30Q70CQ3 517 aa23.06■■□□□ 1.28
NDEL1-207ENST00000580012 PIP4K2CQ8TBX8 421 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms