RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 A0A0D9SEW6 157 aa20.58■□□□□ 0.89
SMG8-203ENST00000578922 EDF1O60869 148 aaKnown RBP20.58■□□□□ 0.89
SMG8-203ENST00000578922 SPAG7O75391 227 aa20.58■□□□□ 0.89
SMG8-203ENST00000578922 WFS1O76024 890 aa20.58■□□□□ 0.89
SMG8-203ENST00000578922 ZWINTO95229 277 aa20.58■□□□□ 0.89
SMG8-203ENST00000578922 AP2A1O95782 977 aa20.58■□□□□ 0.89
SMG8-203ENST00000578922 MT-CYBP00156 380 aaPredicted RBP20.58■□□□□ 0.89
SMG8-203ENST00000578922 KRT16P08779 473 aa20.58■□□□□ 0.89
SMG8-203ENST00000578922 PBX2P40425 430 aa20.58■□□□□ 0.89
SMG8-203ENST00000578922 CCR2P41597 374 aa20.58■□□□□ 0.89
SMG8-203ENST00000578922 TLDC1Q6P9B6 456 aa20.58■□□□□ 0.89
SMG8-203ENST00000578922 LRRC8CQ8TDW0 803 aa20.58■□□□□ 0.89
SMG8-203ENST00000578922 BHMTQ93088 406 aa20.58■□□□□ 0.89
SMG8-203ENST00000578922 NOP53Q9NZM5 478 aaKnown RBP20.58■□□□□ 0.89
SMG8-203ENST00000578922 TCRBV9S1A1TA0A576 114 aa20.58■□□□□ 0.88
SMG8-203ENST00000578922 C5orf67F2Z3F1 127 aa20.58■□□□□ 0.88
SMG8-203ENST00000578922 TYROBPO43914 113 aa20.58■□□□□ 0.88
SMG8-203ENST00000578922 ETFBP38117 255 aa20.58■□□□□ 0.88
SMG8-203ENST00000578922 MAPKAPK2P49137 400 aa20.58■□□□□ 0.88
SMG8-203ENST00000578922 SLC10A7Q0GE19 358 aa20.58■□□□□ 0.88
SMG8-203ENST00000578922 GPATCH11Q8N954 259 aa20.58■□□□□ 0.88
SMG8-203ENST00000578922 GCNAQ96QF7 691 aa20.58■□□□□ 0.88
SMG8-203ENST00000578922 EBNA1BP2Q99848 306 aaKnown RBP20.58■□□□□ 0.88
SMG8-203ENST00000578922 PLAC1Q9HBJ0 212 aa20.58■□□□□ 0.88
SMG8-203ENST00000578922 GLOD4Q9HC38 313 aa20.58■□□□□ 0.88
SMG8-203ENST00000578922 PEX11BO96011 259 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 CA4P22748 312 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 MAXP61244 160 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 UBE3AQ05086 875 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 ITKQ08881 620 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 DNAJC3Q13217 504 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 PRPSAP1Q14558 356 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 UNC5AQ6ZN44 842 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 FAM47EQ6ZV65 393 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 PRPF39Q86UA1 669 aaKnown RBP20.57■□□□□ 0.88
SMG8-203ENST00000578922 LRRC49Q8IUZ0 686 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 DNAAF3Q8N9W5 541 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 OR7D4Q8NG98 312 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 AGAP11Q8TF27 550 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 TCEAL4Q96EI5 215 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 NT5MQ9NPB1 228 aa20.57■□□□□ 0.88
SMG8-203ENST00000578922 YBX2Q9Y2T7 364 aaKnown RBP20.57■□□□□ 0.88
SMG8-203ENST00000578922 TTC24A2A3L6 582 aaPredicted RBP20.56■□□□□ 0.88
SMG8-203ENST00000578922 H3BNC9 293 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 OLFM2O95897 454 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 SERINC3Q13530 473 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 SMAD1Q15797 465 aaKnown RBP20.56■□□□□ 0.88
SMG8-203ENST00000578922 KLHL38Q2WGJ6 581 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 ANO4Q32M45 955 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 C5orf22Q49AR2 442 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 HHATQ5VTY9 493 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 KCTD11Q693B1 232 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 KDELC2Q7Z4H8 507 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 ZNF398Q8TD17 642 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 AZIN2Q96A70 460 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 LRRC37BQ96QE4 947 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 SPON2Q9BUD6 331 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 LRMDAQ9H2I8 198 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 ACSS3Q9H6R3 686 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 SYBUQ9NX95 663 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 MLNP12872 115 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 CDC25CP30307 473 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 GBP2P32456 591 aaPredicted RBP20.56■□□□□ 0.88
SMG8-203ENST00000578922 RPA3P35244 121 aaPredicted RBP20.56■□□□□ 0.88
SMG8-203ENST00000578922 CDH4P55283 916 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 GPM6BQ13491 265 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 KBTBD12Q3ZCT8 623 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 PARP15Q460N3 678 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 IPMKQ8NFU5 416 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 INPP5DQ92835 1189 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 ALKBH8Q96BT7 664 aaKnown RBP20.56■□□□□ 0.88
SMG8-203ENST00000578922 LRRC39Q96DD0 335 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 STAMBPL1Q96FJ0 436 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 RSRC1Q96IZ7 334 aaKnown RBP20.56■□□□□ 0.88
SMG8-203ENST00000578922 TMEM237Q96Q45 408 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 CFAP97Q9P2B7 532 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 ACTL7AQ9Y615 435 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 GBF1Q92538 1859 aa20.56■□□□□ 0.88
SMG8-203ENST00000578922 SDR42E2A6NKP2 422 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 CLASP2O75122 1294 aaKnown RBP20.55■□□□□ 0.88
SMG8-203ENST00000578922 ANP32DO95626 131 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 TPH1P17752 444 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 MARC1Q5VT66 337 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 IL31Q6EBC2 164 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 ADGRD1Q6QNK2 874 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 KIF2BQ8N4N8 673 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 N4BP2L2Q92802 583 aaPredicted RBP20.55■□□□□ 0.88
SMG8-203ENST00000578922 DHRS4Q9BTZ2 278 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 SLC46A2Q9BY10 475 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 C15orf41Q9Y2V0 281 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 GREM1O60565 184 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 PMPCBO75439 489 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 RB1P06400 928 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 RASSF2P50749 326 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 RENBPP51606 427 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 GNA12Q03113 381 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 CES3Q6UWW8 571 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 PAFAH2Q99487 392 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 MYLK2Q9H1R3 596 aa20.55■□□□□ 0.88
SMG8-203ENST00000578922 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms