RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	TOP3B	O95985	862 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	IGHV4-34	P06331	123 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CTSL	P07711	333 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	H2AFZ	P0C0S5	128 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	IL1R2	P27930	398 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CCR5	P51681	352 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ADK	P55263	362 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	SERINC3	Q13530	473 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	DPYSL2	Q16555	572 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	INO80D	Q53TQ3	878 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CARD16	Q5EG05	197 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	NCEH1	Q6PIU2	408 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	DPY19L3	Q6ZPD9	716 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	RFX8	Q6ZV50	586 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	H2AFV	Q71UI9	128 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	OR14C36	Q8NHC7	312 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TEKT4	Q8WW24	435 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	CCDC42	Q96M95	316 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	KCTD15	Q96SI1	283 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ORAI3	Q9BRQ5	295 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	TNKS2	Q9H2K2	1166 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	LRRC19	Q9H756	370 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	ZWILCH	Q9H900	591 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	IL36A	Q9UHA7	158 aa		13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	EIF2B4	Q9UI10	523 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1D-208	ENST00000578501	IGF2R	P11717	2491 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	ASPM	Q8IZT6	3477 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501		A0A1W2PPC4	97 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	RASA4B	C9J798	803 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	RASA4	O43374	803 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	PLRG1	O43660	514 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	BNIP3L	O60238	219 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	FSBP	O95073	299 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	TRIM16	O95361	564 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	TMEM253	P0C7T8	217 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	NUDT1	P36639	197 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	AFF3	P51826	1226 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	METAP1	P53582	386 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	CNTN1	Q12860	1018 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	AGBL4	Q5VU57	503 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	AFMID	Q63HM1	303 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	ZCCHC9	Q8N567	271 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	CHST14	Q8NCH0	376 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	HMCES	Q96FZ2	354 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	LRIG1	Q96JA1	1093 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	BTBD6	Q96KE9	485 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	CHP1	Q99653	195 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	HEPH	Q9BQS7	1158 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	HDAC8	Q9BY41	377 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	RBSN	Q9H1K0	784 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	MIR1-1HG	Q9H1L0	117 aa		13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	CWC15	Q9P013	229 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	FCF1	Q9Y324	198 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1D-208	ENST00000578501	GON4L	Q3T8J9	2241 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	FAM47DP	A6NHR8	397 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501		H3BRJ5	948 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	DAPK3	O43293	454 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	LAT	O43561	262 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	BUB1	O43683	1085 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	LEFTY1	O75610	366 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	GSR	P00390	522 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	ERCC2	P18074	760 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	CCNH	P51946	323 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	ATXN3	P54252	364 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	SNRPD1	P62314	119 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	SLC25A11	Q02978	314 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	DPYS	Q14117	519 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	UAP1L1	Q3KQV9	507 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	ARSI	Q5FYB1	569 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	PIP5KL1	Q5T9C9	394 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	NEK5	Q6P3R8	708 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	IL27RA	Q6UWB1	636 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	POLN	Q7Z5Q5	900 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	LZTR1	Q8N653	840 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	DEFB124	Q8NES8	71 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	OR2AP1	Q8NGE2	309 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	SNX19	Q92543	992 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	MRFAP1L1	Q96HT8	127 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	PPP1R16A	Q96I34	528 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	KLC2	Q9H0B6	622 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	PREB	Q9HCU5	417 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	TM9SF3	Q9HD45	589 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	DYRK4	Q9NR20	520 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	DNAAF2	Q9NVR5	837 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	HECA	Q9UBI9	543 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	ACTL7A	Q9Y615	435 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	WASF2	Q9Y6W5	498 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	PCDH15	Q96QU1	1955 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	FRY	Q5TBA9	3013 aa		13.88	□□□□□ -0.19
CSNK1D-208	ENST00000578501	PI4KA	P42356	2102 aa		13.87	□□□□□ -0.19
CSNK1D-208	ENST00000578501	NUMA1	Q14980	2115 aa		13.87	□□□□□ -0.19
CSNK1D-208	ENST00000578501	TBC1D3D	A0A087WVF3	549 aa		13.87	□□□□□ -0.19
CSNK1D-208	ENST00000578501	TBC1D3I	A0A087WXS9	549 aa		13.87	□□□□□ -0.19
CSNK1D-208	ENST00000578501	TBC1D3E	A0A087X179	549 aa		13.87	□□□□□ -0.19

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