RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 MPP6Q9NZW5 540 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 CCL15-CCL14A0A0B4J2E2 113 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 TYROBPO43914 113 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 CRABP2P29373 138 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 SIX1Q15475 284 aaPredicted RBP18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 CARTPTQ16568 116 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 CCL15Q16663 113 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 PGS1Q32NB8 556 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 ANKRD52Q8NB46 1076 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 SENP8Q96LD8 212 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 BDH2Q9BUT1 245 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 LHX5Q9H2C1 402 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 SLC38A7Q9NVC3 462 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 CCDC189A1A4V9 331 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 MOXD2PA6NHM9 499 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 CBX4O00257 560 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 TRMUO75648 421 aaKnown RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 FARP2O94887 1054 aaPredicted RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 MT-CYBP00156 380 aaPredicted RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 ATP5F1P24539 256 aaPredicted RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 SLC26A2P50443 739 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 FAM117BQ6P1L5 589 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 SPPL2CQ8IUH8 684 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 LRTOMTQ8WZ04 291 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 DLG3Q92796 817 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 KLHL5Q96PQ7 755 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 SPATA16Q9BXB7 569 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 CACYBPQ9HB71 228 aaKnown RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 MRGBPQ9NV56 204 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 U3KQV3 271 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 MED1Q15648 1581 aaPredicted RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 MYH3P11055 1940 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 CCDC154A6NI56 674 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 IRF6O14896 467 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 XRCC1P18887 633 aaPredicted RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 CDH15P55291 814 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 ANKRD13AQ8IZ07 590 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 CENPLQ8N0S6 344 aaPredicted RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 EXOC2Q96KP1 924 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 DPEP3Q9H4B8 488 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 TMPRSS4Q9NRS4 437 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 TRHDEQ9UKU6 1024 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 CITO14578 2027 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 EDIL3O43854 480 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 VPS26AO75436 327 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 NDUFV1P49821 464 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 IRF9Q00978 393 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 MOGSQ13724 837 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 SDHAF4Q5VUM1 108 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 DRICH1Q6PGQ1 229 aaPredicted RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 CATSPERGQ6ZRH7 1159 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 DENND6AQ8IWF6 608 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 FAXDC2Q96IV6 333 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 KCTD15Q96SI1 283 aaPredicted RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 FIZ1Q96SL8 496 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 TRIM62Q9BVG3 475 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 NOL6Q9H6R4 1146 aaKnown RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 SEPT3Q9UH03 358 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 SPEF2Q9C093 1822 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 C2CD4BA6NLJ0 364 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 TTLL13PA6NNM8 815 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 CABYRO75952 493 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 CPSF4O95639 269 aaKnown RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 CD86P42081 329 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 RECQLP46063 649 aaPredicted RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 RAB10P61026 200 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 NRG1Q02297 640 aaPredicted RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 SFT2D3Q587I9 215 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 ZDHHC17Q8IUH5 632 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 ZC3H3Q8IXZ2 948 aaKnown RBP18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 TMEM130Q8N3G9 435 aa18.09■□□□□ 0.49
ATPAF1-214ENST00000576409 RRN3P2A6NIE6 340 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 TNPO2O14787 897 aaKnown RBP18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 DLDP09622 509 aaKnown RBP18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 MATKP42679 507 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 ARHGEF7Q14155 803 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 PLEKHG4Q58EX7 1191 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 PRAMEF19Q5SWL8 479 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 SPESP1Q6UW49 350 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 DLK2Q6UY11 383 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 B3GALNT2Q8NCR0 500 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 RBBP8Q99708 897 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 MORF4L1Q9UBU8 362 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 LNPEPQ9UIQ6 1025 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 PLIN4Q96Q06 1357 aa18.08■□□□□ 0.49
ATPAF1-214ENST00000576409 CHD2O14647 1828 aaKnown RBP18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 ADM5C9JUS6 153 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 CCNT2O60583 730 aaKnown RBP18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 NPR3P17342 541 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 ABL2P42684 1182 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 THOP1P52888 689 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 TIGD2Q4W5G0 525 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 PIWIL4Q7Z3Z4 852 aaKnown RBP18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 SLC22A9Q8IVM8 553 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 ZNF567Q8N184 647 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 FBXO27Q8NI29 283 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 MTFMTQ96DP5 389 aaKnown RBP18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 SLC39A3Q9BRY0 314 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 RTKNQ9BST9 563 aa18.08■□□□□ 0.48
ATPAF1-214ENST00000576409 TXLNGYQ9BZA5 131 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms