RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 POLR1EQ9GZS1 481 aaKnown RBP13.79□□□□□ -0.2
NDE1-209ENST00000574109 FBXO4Q9UKT5 387 aa13.79□□□□□ -0.2
NDE1-209ENST00000574109 CCDC163A0A0D9SF12 145 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 BCLAF3A2AJT9 711 aaKnown RBP13.78□□□□□ -0.2
NDE1-209ENST00000574109 TTC34A8MYJ7 566 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 CD160O95971 181 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 ADH1BP00325 375 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 MT-CO1P00395 513 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 RBP3P10745 1247 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 CCNB1P14635 433 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 CA4P22748 312 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 AVPR2P30518 371 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 CXCR5P32302 372 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 NRLP54845 237 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 ADCY2Q08462 1091 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 NSUN2Q08J23 767 aaKnown RBP eCLIP13.78□□□□□ -0.2
NDE1-209ENST00000574109 GAS6Q14393 721 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 SLC14A2Q15849 920 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 FAM46CQ5VWP2 391 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 ZNF776Q68DI1 518 aaPredicted RBP13.78□□□□□ -0.2
NDE1-209ENST00000574109 ALG1LQ6GMV1 187 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 AADACL2Q6P093 401 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 ARHGAP36Q6ZRI8 547 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 CCDC33Q8N5R6 958 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 TMEM105Q8N8V8 129 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 DTWD2Q8NBA8 298 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 PTPRN2Q92932 1015 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 NKD2Q969F2 451 aaPredicted RBP13.78□□□□□ -0.2
NDE1-209ENST00000574109 TUBGCP5Q96RT8 1024 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 ACOX2Q99424 681 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 LGMNQ99538 433 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 HERPUD2Q9BSE4 406 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 C11orf16Q9NQ32 467 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 SLCO3A1Q9UIG8 710 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 TRHDEQ9UKU6 1024 aa13.78□□□□□ -0.2
NDE1-209ENST00000574109 FCF1Q9Y324 198 aaKnown RBP13.78□□□□□ -0.2
NDE1-209ENST00000574109 A0A1W2PQF6 199 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 TCRBV21S2A2A0A5A6 115 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 WASH3PC4AMC7 463 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 SIN3BO75182 1162 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 MAP3K6O95382 1288 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 PEX11BO96011 259 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 HLA-EP13747 358 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 PAFAH1B1P43034 410 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 CCNHP51946 323 aaPredicted RBP13.77□□□□□ -0.21
NDE1-209ENST00000574109 LMNB2Q03252 620 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 CCDC15Q0P6D6 951 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 TUBB2AQ13885 445 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 BYSLQ13895 437 aaKnown RBP13.77□□□□□ -0.21
NDE1-209ENST00000574109 LLGL1Q15334 1064 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 CCNG2Q16589 344 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 ZNF528Q3MIS6 628 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 CARD16Q5EG05 197 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 C9orf64Q5T6V5 341 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 ITPRIPL1Q6GPH6 555 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 PKN3Q6P5Z2 889 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 SYT10Q6XYQ8 523 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 ZC3H18Q86VM9 953 aaKnown RBP13.77□□□□□ -0.21
NDE1-209ENST00000574109 C1orf210Q8IVY1 113 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 TP53INP2Q8IXH6 220 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 C12orf50Q8NA57 414 aaPredicted RBP13.77□□□□□ -0.21
NDE1-209ENST00000574109 OR2A12Q8NGT7 310 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 SLC35B2Q8TB61 432 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 HTR3CQ8WXA8 447 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 IL12RB2Q99665 862 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 TUBB2BQ9BVA1 445 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 TM6SF2Q9BZW4 377 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 RSPH9Q9H1X1 276 aaPredicted RBP13.77□□□□□ -0.21
NDE1-209ENST00000574109 CD248Q9HCU0 757 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 PRSS16Q9NQE7 514 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 LHX3Q9UBR4 397 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 EBF1Q9UH73 591 aa13.77□□□□□ -0.21
NDE1-209ENST00000574109 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.76□□□□□ -0.21
NDE1-209ENST00000574109 A0A1W2PQ67 120 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 FAM86C2PA6NEL3 165 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 SMAD6O43541 496 aaKnown RBP13.76□□□□□ -0.21
NDE1-209ENST00000574109 PI15O43692 258 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 LIASO43766 372 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 OPHN1O60890 802 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 SOCS5O75159 536 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 POP4O95707 220 aaKnown RBP13.76□□□□□ -0.21
NDE1-209ENST00000574109 ITGAVP06756 1048 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 NFKBIAP25963 317 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 STIP1P31948 543 aaKnown RBP13.76□□□□□ -0.21
NDE1-209ENST00000574109 ACTN2P35609 894 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 WASP42768 502 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 SLC10A7Q0GE19 358 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 DARS2Q6PI48 645 aaKnown RBP13.76□□□□□ -0.21
NDE1-209ENST00000574109 KBTBD6Q86V97 674 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 RASSF3Q86WH2 238 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 TMIEQ8NEW7 156 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 PRCCQ92733 491 aaPredicted RBP13.76□□□□□ -0.21
NDE1-209ENST00000574109 RUNDC3BQ96NL0 473 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 NUDCD1Q96RS6 583 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 HEPHQ9BQS7 1158 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 CPEB1Q9BZB8 566 aaKnown RBP13.76□□□□□ -0.21
NDE1-209ENST00000574109 ATP13A3Q9H7F0 1226 aa13.76□□□□□ -0.21
NDE1-209ENST00000574109 BCCIPQ9P287 314 aaKnown RBP eCLIP13.76□□□□□ -0.21
NDE1-209ENST00000574109 SAE1Q9UBE0 346 aaPredicted RBP13.76□□□□□ -0.21
NDE1-209ENST00000574109 IL36AQ9UHA7 158 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms