RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 MATN3O15232 486 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 BNIP3LO60238 219 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 SIN3BO75182 1162 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 COL9A1P20849 921 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 HOXA6P31267 233 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 PPIDQ08752 370 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 CAMK2GQ13555 558 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 RFTN1Q14699 578 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 FAM182AQ5T1J6 154 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 ANO7Q6IWH7 933 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 TIGD7Q6NT04 549 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 KIAA1211LQ6NV74 962 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 C22orf39Q6P5X5 142 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 Q6ZVU0 165 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 CCDC13Q8IYE1 715 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 PRELID2Q8N945 189 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 FRS2Q8WU20 508 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 HMGB4Q8WW32 186 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 OR8D1Q8WZ84 308 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 ISG20Q96AZ6 181 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 ERLEC1Q96DZ1 483 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 ZNF599Q96NL3 588 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 IRF2BPLQ9H1B7 796 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 HOMER3Q9NSC5 361 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 HAUS2Q9NVX0 235 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 SEPT10Q9P0V9 454 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 DNPEPQ9ULA0 475 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 ZNF148Q9UQR1 794 aa13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 FCF1Q9Y324 198 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-214ENST00000573876 KMT2EQ8IZD2 1858 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 CCDC163A0A0D9SF12 145 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 KCNK1O00180 336 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 AXIN1O15169 862 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 SMAD6O43541 496 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 LIASO43766 372 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 NEBLO76041 1014 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 TMCC1O94876 653 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 CD160O95971 181 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 JCHAINP01591 159 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 ACADMP11310 421 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 CCNB1P14635 433 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 RBL1P28749 1068 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 KCNJ1P48048 391 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 RENBPP51606 427 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 RHOAP61586 193 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 SNRPD1P62314 119 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 SLC10A7Q0GE19 358 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 SFSWAPQ12872 951 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 TUBB2AQ13885 445 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 BYSLQ13895 437 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 ELAVL3Q14576 367 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 CYTH1Q15438 398 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 ZNF528Q3MIS6 628 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 SLC45A4Q5BKX6 768 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 CARD16Q5EG05 197 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 C9orf64Q5T6V5 341 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 MARC1Q5VT66 337 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 ZNF776Q68DI1 518 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 HEATR6Q6AI08 1181 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 TSSK4Q6SA08 328 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 KIAA1324Q6UXG2 1013 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 TMPRSS6Q8IU80 811 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 RYBPQ8N488 228 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 SLC35B2Q8TB61 432 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 PRCCQ92733 491 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 PTPRN2Q92932 1015 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 MAGOHBQ96A72 148 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 HDAC11Q96DB2 347 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 SIPA1Q96FS4 1042 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 TUBB2BQ9BVA1 445 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 CINPQ9BW66 212 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 FRMD8P1Q9BZ68 369 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 KCNH6Q9H252 994 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 MTG2Q9H4K7 406 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 SEPT3Q9UH03 358 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 EBF1Q9UH73 591 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 DRG1Q9Y295 367 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 CKAP5Q14008 2032 aa13.11□□□□□ -0.31
NPLOC4-214ENST00000573876 BCLAF3A2AJT9 711 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 ALOX15BO15296 676 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 IGSF6O95976 241 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 PEX11BO96011 259 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 GSRP00390 522 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 DNTTP04053 509 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 SP9P0CG40 484 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 GABRG2P18507 467 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 PXNP49023 591 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 FNTBP49356 437 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 RAD51Q06609 339 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 ZNF33AQ06730 810 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 HNRNPDQ14103 355 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 ZNF235Q14590 738 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 LBRQ14739 615 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 PRKD1Q15139 912 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 FAM46CQ5VWP2 391 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 LONP2Q86WA8 852 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 CDKL3Q8IVW4 592 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 PLPP6Q8IY26 295 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 MAML2Q8IZL2 1156 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms