RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 FSCN3Q9NQT6 498 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 CWC15Q9P013 229 aaKnown RBP12.91□□□□□ -0.34
TVP23B-204ENST00000571018 UVRAGQ9P2Y5 699 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 IL36AQ9UHA7 158 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 TPX2Q9ULW0 747 aaKnown RBP12.91□□□□□ -0.34
TVP23B-204ENST00000571018 CHD5Q8TDI0 1954 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 CFAP54Q96N23 3096 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 DCDC2BA2VCK2 349 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 PLK4O00444 970 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 KPNA3O00505 521 aaPredicted RBP12.9□□□□□ -0.34
TVP23B-204ENST00000571018 DAPK3O43293 454 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 PLRG1O43660 514 aaKnown RBP12.9□□□□□ -0.34
TVP23B-204ENST00000571018 BUB1O43683 1085 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 TMEM253P0C7T8 217 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 RARAP10276 462 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 ERCC2P18074 760 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 DNA2P51530 1060 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 CCR5P51681 352 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 CCNHP51946 323 aaPredicted RBP12.9□□□□□ -0.34
TVP23B-204ENST00000571018 SLC25A11Q02978 314 aaKnown RBP12.9□□□□□ -0.34
TVP23B-204ENST00000571018 CCDC15Q0P6D6 951 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 CNTN1Q12860 1018 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 POM121L1PQ3SYA9 428 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 INO80DQ53TQ3 878 aaPredicted RBP12.9□□□□□ -0.34
TVP23B-204ENST00000571018 AGBL4Q5VU57 503 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 LEKR1Q6ZMV7 388 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 GAS2L3Q86XJ1 694 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 ZNF354CQ86Y25 554 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 TEKT4Q8WW24 435 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 SNX19Q92543 992 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 HEPHQ9BQS7 1158 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 ZDHHC5Q9C0B5 715 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 SLC39A8Q9C0K1 460 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 KLC2Q9H0B6 622 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 ZWILCHQ9H900 591 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 CTTNBP2NLQ9P2B4 639 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 HECAQ9UBI9 543 aaPredicted RBP12.9□□□□□ -0.34
TVP23B-204ENST00000571018 SLCO1B1Q9Y6L6 691 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 WASF2Q9Y6W5 498 aa12.9□□□□□ -0.34
TVP23B-204ENST00000571018 TBC1D3DA0A087WVF3 549 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TBC1D3IA0A087WXS9 549 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TBC1D3EA0A087X179 549 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TBC1D3KA0A087X1G2 549 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 A0A1W2PPC4 97 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TBC1D3FA6NER0 549 aaPredicted RBP12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TBC1D3LB9A6J9 549 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 H3BRJ5 948 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 RNF103O00237 685 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 LEFTY1O75610 366 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 GSRP00390 522 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TBC1D3HP0C7X1 549 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 ARL4AP40617 200 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 MAPK8P45983 427 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 ATXN3P54252 364 aaPredicted RBP12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TAS2R38P59533 333 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 SNRPD1P62314 119 aaKnown RBP12.89□□□□□ -0.35
TVP23B-204ENST00000571018 DPYSQ14117 519 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 SMTNL2Q2TAL5 461 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 PIP5KL1Q5T9C9 394 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 AFMIDQ63HM1 303 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TBC1D3GQ6DHY5 549 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TXNRD3NBQ6F5E7 133 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TBC1D3CQ6IPX1 549 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TBC1D3Q8IZP1 549 aaPredicted RBP12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TC2NQ8N9U0 490 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 OR2AP1Q8NGE2 309 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 GRIN3AQ8TCU5 1115 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 HSPH1Q92598 858 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 ARRDC3Q96B67 414 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 MRFAP1L1Q96HT8 127 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 CELF6Q96J87 481 aaKnown RBP12.89□□□□□ -0.35
TVP23B-204ENST00000571018 LRIG1Q96JA1 1093 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 GTPBP2Q9BX10 602 aaKnown RBP12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TM6SF2Q9BZW4 377 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 EBF2Q9HAK2 575 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 TM9SF3Q9HD45 589 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 DYRK4Q9NR20 520 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.89□□□□□ -0.35
TVP23B-204ENST00000571018 SPTLC3Q9NUV7 552 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 LCMT1Q9UIC8 334 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 PCDH15Q96QU1 1955 aa12.89□□□□□ -0.35
TVP23B-204ENST00000571018 NUMA1Q14980 2115 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 ARHGAP42A6NI28 874 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 LATO43561 262 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 TMCC1O94876 653 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 PROSCO94903 275 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 POP4O95707 220 aaKnown RBP12.88□□□□□ -0.35
TVP23B-204ENST00000571018 GRIA4P48058 902 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 PAPOLAP51003 745 aaKnown RBP12.88□□□□□ -0.35
TVP23B-204ENST00000571018 ZNF75DP51815 510 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 AFF3P51826 1226 aaKnown RBP12.88□□□□□ -0.35
TVP23B-204ENST00000571018 RACK1P63244 317 aaKnown RBP12.88□□□□□ -0.35
TVP23B-204ENST00000571018 GRIK2Q13002 908 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 HADHQ16836 314 aaKnown RBP12.88□□□□□ -0.35
TVP23B-204ENST00000571018 NEK5Q6P3R8 708 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 ERN2Q76MJ5 926 aaKnown RBP12.88□□□□□ -0.35
TVP23B-204ENST00000571018 POLNQ7Z5Q5 900 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 ARHGAP12Q8IWW6 846 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 MINDY1Q8N5J2 469 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 LZTR1Q8N653 840 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms