RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 KCNK5O95279 499 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 TBC1D3HP0C7X1 549 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 GRIA4P48058 902 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 CSNK1EP49674 416 aaKnown RBP13.27□□□□□ -0.29
CNOT1-220ENST00000569916 AFF3P51826 1226 aaKnown RBP13.27□□□□□ -0.29
CNOT1-220ENST00000569916 SERINC3Q13530 473 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 PIGHQ14442 188 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-220ENST00000569916 SLC18A3Q16572 532 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 ARSIQ5FYB1 569 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 PPP6R3Q5H9R7 873 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-220ENST00000569916 TBC1D3GQ6DHY5 549 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 TBC1D3CQ6IPX1 549 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 SARM1Q6SZW1 724 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 RFX8Q6ZV50 586 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 ZNF354CQ86Y25 554 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 PLPP6Q8IY26 295 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 TBC1D3Q8IZP1 549 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-220ENST00000569916 OR2AP1Q8NGE2 309 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 VOPP1Q96AW1 172 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 BTBD6Q96KE9 485 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 SLC6A18Q96N87 628 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 HEPHQ9BQS7 1158 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 TPX2Q9ULW0 747 aaKnown RBP13.27□□□□□ -0.29
CNOT1-220ENST00000569916 ANKRD36A6QL64 1941 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 UPK3BL1B0FP48 263 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 UPK3BL2E5RIL1 263 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 GIPC1O14908 333 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 BUB1O43683 1085 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 TMCC1O94876 653 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 GSRP00390 522 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 ADRB1P08588 477 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 TPM1P09493 284 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 CD59P13987 128 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 ERCC2P18074 760 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 CSRP1P21291 193 aaKnown RBP13.26□□□□□ -0.29
CNOT1-220ENST00000569916 NOVA1P51513 510 aaKnown RBP13.26□□□□□ -0.29
CNOT1-220ENST00000569916 DNA2P51530 1060 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 NDST2P52849 883 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 ADKP55263 362 aaKnown RBP13.26□□□□□ -0.29
CNOT1-220ENST00000569916 RACK1P63244 317 aaKnown RBP13.26□□□□□ -0.29
CNOT1-220ENST00000569916 SLC25A11Q02978 314 aaKnown RBP13.26□□□□□ -0.29
CNOT1-220ENST00000569916 TEAD4Q15561 434 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 DPYSL2Q16555 572 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 SMTNL2Q2TAL5 461 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 KCNT1Q5JUK3 1230 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 TXNRD3NBQ6F5E7 133 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 PSAPL1Q6NUJ1 521 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 ERN2Q76MJ5 926 aaKnown RBP13.26□□□□□ -0.29
CNOT1-220ENST00000569916 PIP4P1Q86T03 277 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 TRIM69Q86WT6 500 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 NPWQ8N729 165 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 OR6K2Q8NGY2 324 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 CASKIN2Q8WXE0 1202 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 PPP1R16AQ96I34 528 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 CELF6Q96J87 481 aaKnown RBP13.26□□□□□ -0.29
CNOT1-220ENST00000569916 PACSIN1Q9BY11 444 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 HDAC8Q9BY41 377 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 ZDHHC6Q9H6R6 413 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 IL21RQ9HBE5 538 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 PDFQ9HBH1 243 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 PREBQ9HCU5 417 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 DYRK4Q9NR20 520 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 DONSONQ9NYP3 566 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 CWC15Q9P013 229 aaKnown RBP13.26□□□□□ -0.29
CNOT1-220ENST00000569916 HECAQ9UBI9 543 aaPredicted RBP13.26□□□□□ -0.29
CNOT1-220ENST00000569916 IP6K2Q9UHH9 426 aa13.26□□□□□ -0.29
CNOT1-220ENST00000569916 WNT9AO14904 365 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 DAPK3O43293 454 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 CER1O95813 267 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 WNT1P04628 370 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 RARAP10276 462 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 ITGB7P26010 798 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 GKP32189 559 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 HCAR3P49019 387 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 NEK3P51956 506 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 ZNF135P52742 658 aaPredicted RBP13.25□□□□□ -0.29
CNOT1-220ENST00000569916 SNRPD1P62314 119 aaKnown RBP13.25□□□□□ -0.29
CNOT1-220ENST00000569916 TBX2Q13207 712 aaPredicted RBP13.25□□□□□ -0.29
CNOT1-220ENST00000569916 DPYSQ14117 519 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 KIF19Q2TAC6 998 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 HLA-BQ31612 363 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 INO80DQ53TQ3 878 aaPredicted RBP13.25□□□□□ -0.29
CNOT1-220ENST00000569916 AFMIDQ63HM1 303 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 IL27RAQ6UWB1 636 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 ARHGAP12Q8IWW6 846 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 NETO2Q8NC67 525 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 DEFB124Q8NES8 71 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 ZNF564Q8TBZ8 553 aaPredicted RBP13.25□□□□□ -0.29
CNOT1-220ENST00000569916 HSPH1Q92598 858 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 CHP1Q99653 195 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 SLC39A8Q9C0K1 460 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 GAREM1Q9H706 876 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 ZWILCHQ9H900 591 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.25□□□□□ -0.29
CNOT1-220ENST00000569916 ZNHIT6Q9NWK9 470 aaKnown RBP13.25□□□□□ -0.29
CNOT1-220ENST00000569916 LHX3Q9UBR4 397 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 ANKRD6Q9Y2G4 727 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 FNDC3AQ9Y2H6 1198 aaKnown RBP13.25□□□□□ -0.29
CNOT1-220ENST00000569916 SNX11Q9Y5W9 270 aa13.25□□□□□ -0.29
CNOT1-220ENST00000569916 A0A1W2PR77 199 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms