RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 TMC6Q7Z403 805 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 MIB1Q86YT6 1006 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 NUP93Q8N1F7 819 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 TAB3Q8N5C8 712 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-218ENST00000569732 UBA3Q8TBC4 463 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 SLC35F5Q8WV83 523 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 SYN2Q92777 582 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-218ENST00000569732 IQCDQ96DY2 449 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 SPAG5Q96R06 1193 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 PCDHB18PQ96TA0 734 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 MED10Q9BTT4 135 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 MRPL18Q9H0U6 180 aaKnown RBP7.39□□□□□ -1.23
CNOT1-218ENST00000569732 LHX5Q9H2C1 402 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 GAREM1Q9H706 876 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 DMAP1Q9NPF5 467 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-218ENST00000569732 ITM2CQ9NQX7 267 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 DNAJC17Q9NVM6 304 aaKnown RBP7.39□□□□□ -1.23
CNOT1-218ENST00000569732 WSB2Q9NYS7 404 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-218ENST00000569732 USP36Q9P275 1121 aaKnown RBP7.39□□□□□ -1.23
CNOT1-218ENST00000569732 NENFQ9UMX5 172 aa7.39□□□□□ -1.23
CNOT1-218ENST00000569732 PCNX2A6NKB5 2137 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 M0QYV0 167 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 CAPN9O14815 690 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 XPO1O14980 1071 aaKnown RBP7.38□□□□□ -1.23
CNOT1-218ENST00000569732 BCAT2O15382 392 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-218ENST00000569732 MED7O43513 233 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 TNFSF14O43557 240 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 DNAJA2O60884 412 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 C1QL1O75973 258 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 CYP1A1P04798 512 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-218ENST00000569732 MMEP08473 750 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 ATXN1LP0C7T5 689 aaKnown RBP7.38□□□□□ -1.23
CNOT1-218ENST00000569732 ZDHHC11BP0C7U3 371 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 SETSIPP0DME0 302 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 HLA-EP13747 358 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 FERP16591 822 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 KIF11P52732 1056 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 BPIFB4P59827 614 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 NOMO3P69849 1222 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 CDR2Q01850 454 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 IFRD2Q12894 506 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-218ENST00000569732 HLA-BQ31612 363 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 HECTD3Q5T447 861 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 ZBTB37Q5TC79 503 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 DCAF12L1Q5VU92 463 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 SFMBT2Q5VUG0 894 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 TAF3Q5VWG9 929 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 CDCP2Q5VXM1 449 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 PMF1Q6P1K2 205 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 KIAA1324Q6UXG2 1013 aaKnown RBP7.38□□□□□ -1.23
CNOT1-218ENST00000569732 HTR3DQ70Z44 454 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 NLRC3Q7RTR2 1065 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 ZNF571Q7Z3V5 609 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-218ENST00000569732 ZNF605Q86T29 641 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 PIGZQ86VD9 579 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 TMPRSS12Q86WS5 348 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 ZNF677Q86XU0 584 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 TMEM25Q86YD3 366 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 BBS7Q8IWZ6 715 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 ZCCHC9Q8N567 271 aaKnown RBP7.38□□□□□ -1.23
CNOT1-218ENST00000569732 TC2NQ8N9U0 490 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 C1orf131Q8NDD1 294 aaKnown RBP7.38□□□□□ -1.23
CNOT1-218ENST00000569732 SCAMP5Q8TAC9 235 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 SLC30A5Q8TAD4 765 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 PIP4K2CQ8TBX8 421 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 KCTD13Q8WZ19 329 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 FBXO32Q969P5 355 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 NXPE2Q96DL1 559 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 TOE1Q96GM8 510 aaKnown RBP7.38□□□□□ -1.23
CNOT1-218ENST00000569732 FANCD2OSQ96PS1 177 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 ACOX2Q99424 681 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 AGPAT1Q99943 283 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 PCED1AQ9H1Q7 454 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 GRPEL1Q9HAV7 217 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 IL21RQ9HBE5 538 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 COMMD8Q9NX08 183 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 WDR35Q9P2L0 1181 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 HESX1Q9UBX0 185 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 TJP2Q9UDY2 1190 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 KLHL3Q9UH77 587 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 MKL2Q9ULH7 1088 aa7.38□□□□□ -1.23
CNOT1-218ENST00000569732 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.38□□□□□ -1.23
CNOT1-218ENST00000569732 TEX51A0A1B0GUA7 166 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 GOLGA6L3A6NEY3 463 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 PRRT4C9JH25 899 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 NEDD8-MDP1E9PL57 170 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 FAM229AH3BQW9 127 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 DDX3XO00571 662 aaKnown RBP eCLIP7.37□□□□□ -1.23
CNOT1-218ENST00000569732 PDPK1O15530 556 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 RRP8O43159 456 aaKnown RBP7.37□□□□□ -1.23
CNOT1-218ENST00000569732 LSM8O95777 96 aaKnown RBP7.37□□□□□ -1.23
CNOT1-218ENST00000569732 IGLV3-19P01714 112 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 PRB1P04280 392 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 PLEKP08567 350 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-218ENST00000569732 CDK4P11802 303 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 SKILP12757 684 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 UNGP13051 313 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-218ENST00000569732 PLA2G2AP14555 144 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 TYRP14679 529 aa7.37□□□□□ -1.23
CNOT1-218ENST00000569732 KRT9P35527 623 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms