RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 CPEB1Q9BZB8 566 aaKnown RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 PREBQ9HCU5 417 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 TM9SF3Q9HD45 589 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 CWC15Q9P013 229 aaKnown RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 RCOR3Q9P2K3 495 aaPredicted RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 UVRAGQ9P2Y5 699 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 IP6K2Q9UHH9 426 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 LCMT1Q9UIC8 334 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 HPCAL4Q9UM19 191 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 DMTF1Q9Y222 760 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 FARP1Q9Y4F1 1045 aaPredicted RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 PCDHGB2Q9Y5G2 931 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 ACTL7AQ9Y615 435 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 SLCO1B1Q9Y6L6 691 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 KNTC1P50748 2209 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 ATXN2Q99700 1313 aaKnown RBP8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 PLXNB3Q9ULL4 1909 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 MEI4A8MW99 385 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 MYO1FO00160 1098 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 AP1G1O43747 822 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 CREB3O43889 395 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 PRAMEF11O60813 436 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 RNGTTO60942 597 aaKnown RBP8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 LEFTY1O75610 366 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 KCNK5O95279 499 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 LCA5LO95447 670 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 POP4O95707 220 aaKnown RBP8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 ADRB1P08588 477 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 H2AFZP0C0S5 128 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 TMEM253P0C7T8 217 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 RARAP10276 462 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 CD59P13987 128 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 TCF4P15884 667 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 ERCC2P18074 760 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 FECHP22830 423 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 ITGB7P26010 798 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 MAN1A1P33908 653 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 CTSKP43235 329 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 CSNK1DP48730 415 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 NUMBP49757 651 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 AFF3P51826 1226 aaKnown RBP8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 TPI1P60174 286 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 NSUN2Q08J23 767 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 CCDC15Q0P6D6 951 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 GRIK2Q13002 908 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 CYTH1Q15438 398 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 ZNF423Q2M1K9 1284 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 MYLK3Q32MK0 819 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 ARSIQ5FYB1 569 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 IL27RAQ6UWB1 636 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 H2AFVQ71UI9 128 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 IQCHQ86VS3 1027 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 ZSCAN30Q86W11 494 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 CACUL1Q86Y37 369 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 CNGA4Q8IV77 575 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 MINDY1Q8N5J2 469 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 TC2NQ8N9U0 490 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 RNF214Q8ND24 703 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 OR2AP1Q8NGE2 309 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 ASB12Q8WXK4 309 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 SPOCK2Q92563 424 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 HMCESQ96FZ2 354 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 NUP85Q9BW27 656 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 SLC39A8Q9C0K1 460 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 DHX35Q9H5Z1 703 aaKnown RBP8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 GPATCH2LQ9NWQ4 482 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 MYO1AQ9UBC5 1043 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 DKK3Q9UBP4 350 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 IL36AQ9UHA7 158 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 PCSK1NQ9UHG2 260 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 INTUQ9ULD6 942 aa8.33□□□□□ -1.08
HDGFL3-205ENST00000568129 MED19A0JLT2 244 aaPredicted RBP8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 TSPAN11A1L157 253 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 EEF2KO00418 725 aaKnown RBP8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 DFNA5O60443 496 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 OPHN1O60890 802 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 CBFA2T3O75081 653 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 PROSCO94903 275 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 PEX11BO96011 259 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 WNT1P04628 370 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 CFIP05156 583 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 ARHGAP25P42331 645 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 RXRGP48443 463 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 CSNK1EP49674 416 aaKnown RBP8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 CCNHP51946 323 aaPredicted RBP8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 HADHBP55084 474 aaKnown RBP8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 ADKP55263 362 aaKnown RBP8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 SNRPD1P62314 119 aaKnown RBP8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 PPP2CBP62714 309 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 PPP2CAP67775 309 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 IL10RBQ08334 325 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 OVGP1Q12889 678 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 RFTN1Q14699 578 aaPredicted RBP8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 TMEM259Q4ZIN3 620 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 ZNF805Q5CZA5 627 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 KCNT1Q5JUK3 1230 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 TXNRD3NBQ6F5E7 133 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 ERN2Q76MJ5 926 aaKnown RBP8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 GLRX5Q86SX6 157 aa8.32□□□□□ -1.08
HDGFL3-205ENST00000568129 VSIG1Q86XK7 387 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms