RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 ZNF33AQ06730 810 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 CNTN1Q12860 1018 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 PAFAH1B3Q15102 231 aaKnown RBP9.97□□□□□ -0.81
CLK3-220ENST00000567992 PDK2Q15119 407 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 CYTH1Q15438 398 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 CSRP2Q16527 193 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 POM121L1PQ3SYA9 428 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 ANKRD20A8PQ5CZ79 823 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 ATXN7L2Q5T6C5 722 aaPredicted RBP9.97□□□□□ -0.81
CLK3-220ENST00000567992 PIP5KL1Q5T9C9 394 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 LRRC38Q5VT99 294 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 AGBL4Q5VU57 503 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 TCEAL6Q6IPX3 200 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 C11orf63Q6NUN7 778 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 TMCO3Q6UWJ1 677 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 CYP2U1Q7Z449 544 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 DSG4Q86SJ6 1040 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 PLPP6Q8IY26 295 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 LZTR1Q8N653 840 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 TMIEQ8NEW7 156 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 CADM4Q8NFZ8 388 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 OR2AP1Q8NGE2 309 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 OR6K2Q8NGY2 324 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 TPCN2Q8NHX9 752 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 C1orf216Q8TAB5 229 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 GRIN3AQ8TCU5 1115 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 CASKIN2Q8WXE0 1202 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 TCEAL3Q969E4 200 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 HINFPQ9BQA5 517 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 ORAI3Q9BRQ5 295 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 TM6SF2Q9BZW4 377 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 BTBD1Q9H0C5 482 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 NEUROG2Q9H2A3 272 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 GRPEL1Q9HAV7 217 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 SGK2Q9HBY8 427 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 UBA2Q9UBT2 640 aaPredicted RBP9.97□□□□□ -0.81
CLK3-220ENST00000567992 IL36AQ9UHA7 158 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 HPCAL4Q9UM19 191 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 SLCO1B1Q9Y6L6 691 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 CACNA1EQ15878 2313 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 TP53BP1Q12888 1972 aaPredicted RBP9.97□□□□□ -0.81
CLK3-220ENST00000567992 GON4LQ3T8J9 2241 aa9.97□□□□□ -0.81
CLK3-220ENST00000567992 ADAMTS9Q9P2N4 1935 aa9.96□□□□□ -0.81
CLK3-220ENST00000567992 METTL12A8MUP2 240 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 ZNF487B1APH4 448 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 C1QTNF3-AMACRE9PGA6 284 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 MUSKO15146 869 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 PSTPIP1O43586 416 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 PLRG1O43660 514 aaKnown RBP9.96□□□□□ -0.82
CLK3-220ENST00000567992 NDUFS2O75306 463 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 PRNPP04156 253 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 ZNF806P0C7X5 589 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 KDELR1P24390 212 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 PI4KAP42356 2102 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 NOP2P46087 812 aaKnown RBP9.96□□□□□ -0.82
CLK3-220ENST00000567992 RGRP47804 291 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 GSDMDP57764 484 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 TAS2R38P59533 333 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 PPP2CBP62714 309 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 PPP2CAP67775 309 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 IL10RBQ08334 325 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 GALNT2Q10471 571 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 SF3A2Q15428 464 aaKnown RBP9.96□□□□□ -0.82
CLK3-220ENST00000567992 TAZQ16635 292 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 ARSIQ5FYB1 569 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 DCAF12L1Q5VU92 463 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 FAM46CQ5VWP2 391 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 PRR23CQ6ZRP0 262 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 VSIG1Q86XK7 387 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 ZNF354CQ86Y25 554 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 SYT12Q8IV01 421 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 RHOT1Q8IXI2 618 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 KIAA2013Q8IYS2 634 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 HDDC3Q8N4P3 179 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 PLD5Q8N7P1 536 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 LRRC57Q8N9N7 239 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 KCTD6Q8NC69 237 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 DNASE2BQ8WZ79 361 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 PIGKQ92643 395 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 EXOC2Q96KP1 924 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 CCDC114Q96M63 670 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 NSMCE3Q96MG7 304 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 HEPHQ9BQS7 1158 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 CALN1Q9BXU9 219 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 PCED1AQ9H1Q7 454 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 LUC7LQ9NQ29 371 aaKnown RBP9.96□□□□□ -0.82
CLK3-220ENST00000567992 VPS45Q9NRW7 570 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 RXFP3Q9NSD7 469 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 HECAQ9UBI9 543 aaPredicted RBP9.96□□□□□ -0.82
CLK3-220ENST00000567992 TRIM10Q9UDY6 481 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 IPO11Q9UI26 975 aaKnown RBP9.96□□□□□ -0.82
CLK3-220ENST00000567992 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.96□□□□□ -0.82
CLK3-220ENST00000567992 ALG6Q9Y672 507 aa9.96□□□□□ -0.82
CLK3-220ENST00000567992 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.96□□□□□ -0.82
CLK3-220ENST00000567992 DOCK9Q9BZ29 2069 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 LRRD1A4D1F6 860 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 GRID2IPA4D2P6 1211 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 KPNA3O00505 521 aaPredicted RBP9.95□□□□□ -0.82
CLK3-220ENST00000567992 INSIG1O15503 277 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 SLC7A4O43246 635 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms