RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 HORMAD1Q86X24 394 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 PHF13Q86YI8 300 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 MFSD2AQ8NA29 543 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 CENPIQ92674 756 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 TBC1D31Q96DN5 1066 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 KLHDC7BQ96G42 594 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 HEPHQ9BQS7 1158 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 OSBPL2Q9H1P3 480 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 KDM4CQ9H3R0 1056 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 PREBQ9HCU5 417 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 GPATCH2LQ9NWQ4 482 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 PPARGC1AQ9UBK2 798 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 ZFR2Q9UPR6 939 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 NEU3Q9UQ49 428 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 DMTF1Q9Y222 760 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 NYNRINQ9P2P1 1898 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 TMEM8BA6NDV4 472 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 SIGLEC16A6NMB1 481 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 PRAMEF26H0Y7S4 382 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 KRIT1O00522 736 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 ENC1O14682 589 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 RAMP2O60895 175 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 FERP16591 822 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 TNFAIP3P21580 790 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 NEK3P51956 506 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 OGDHQ02218 1023 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 SLC20A2Q08357 652 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 ZNF284Q2VY69 593 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 INAVAQ3KP66 663 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 ZNF542PQ5EBM4 170 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 LRRC73Q5JTD7 316 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 ATXN7L2Q5T6C5 722 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 ACBD5Q5T8D3 534 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 FBXL19Q6PCT2 694 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 ZNF783Q6ZMS7 281 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 KDM7AQ6ZMT4 941 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 PARS2Q7L3T8 475 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 TMPRSS7Q7RTY8 843 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 SLFN11Q7Z7L1 901 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 PCDH20Q8N6Y1 951 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 C3orf20Q8ND61 904 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 OR13H1Q8NG92 308 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 ARHGEF2Q92974 986 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 CALN1Q9BXU9 219 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 KLC2Q9H0B6 622 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 TMEM51Q9NW97 253 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 TMEM248Q9NWD8 314 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 GGT7Q9UJ14 662 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 ITM2BQ9Y287 266 aa12.45□□□□□ -0.42
GTF3C1-208ENST00000567843 ARID1BQ8NFD5 2236 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 TCRBV5S1A1TA0A578 114 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 ANKRD62A6NC57 917 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 BUB1O43683 1085 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 DKK1O94907 266 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 PAK4O96013 591 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 ADRB3P13945 408 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 ITIH2P19823 946 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 EPHB2P29323 1055 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 AKT2P31751 481 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 L1CAMP32004 1257 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 ABL2P42684 1182 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 MAPKAPK2P49137 400 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 NRG1Q02297 640 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 C1QBPQ07021 282 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 POLD3Q15054 466 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 EFHC2Q5JST6 749 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 ACAD10Q6JQN1 1059 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 CAVIN1Q6NZI2 390 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 DCUN1D2Q6PH85 259 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 C19orf48Q6RUI8 117 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 IRF2BP2Q7Z5L9 587 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 MCOLN2Q8IZK6 566 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 NTAN1Q96AB6 310 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 PPP1R16AQ96I34 528 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 HDAC8Q9BY41 377 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 CEP44Q9C0F1 390 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 CCDC86Q9H6F5 360 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 NOL6Q9H6R4 1146 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 UCKL1Q9NWZ5 548 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 TPX2Q9ULW0 747 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 DAAM1Q9Y4D1 1078 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 FADS3Q9Y5Q0 445 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 DSPP15924 2871 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 PLXNB3Q9ULL4 1909 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 DMXL2Q8TDJ6 3036 aa12.44□□□□□ -0.42
GTF3C1-208ENST00000567843 DOCK4Q8N1I0 1966 aa12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 TRABD2BA6NFA1 517 aa12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 LRRC53A6NM62 1247 aa12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 C16orf96A6NNT2 1141 aa12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 RAD51BO15315 384 aa12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 FFAR2O15552 330 aa12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 MAGEC1O60732 1142 aa12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 CAPNS1P04632 268 aa12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 UGT2B4P06133 528 aa12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 MYF5P13349 255 aa12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 HNRNPA2B1P22626 353 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 RXRGP48443 463 aa12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 ZNF143P52747 638 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-208ENST00000567843 CCDC15Q0P6D6 951 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms