RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 CDKL3Q8IVW4 592 aaPredicted RBP11.68□□□□□ -0.54
KARS-207ENST00000566560 CCDC13Q8IYE1 715 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 COG1Q8WTW3 980 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 LRRN4Q8WUT4 740 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 TFB1MQ8WVM0 346 aaKnown RBP11.68□□□□□ -0.54
KARS-207ENST00000566560 CASKIN2Q8WXE0 1202 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 ZNF599Q96NL3 588 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 LGMNQ99538 433 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 GABRG3Q99928 467 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 FAM118BQ9BPY3 351 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 CINPQ9BW66 212 aaPredicted RBP11.68□□□□□ -0.54
KARS-207ENST00000566560 CEP44Q9C0F1 390 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 BRD8Q9H0E9 1235 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 TMEM245Q9H330 911 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 C11orf16Q9NQ32 467 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 DLGAP2Q9P1A6 1054 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 SLCO3A1Q9UIG8 710 aa11.68□□□□□ -0.54
KARS-207ENST00000566560 ANKRD36A6QL64 1941 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 WASH3PC4AMC7 463 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 H7C0C1 242 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 KIF2AO00139 706 aaPredicted RBP11.67□□□□□ -0.54
KARS-207ENST00000566560 CES2O00748 559 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 ZNF185O15231 689 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 SMAD6O43541 496 aaKnown RBP11.67□□□□□ -0.54
KARS-207ENST00000566560 BNIP3LO60238 219 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 SYNCRIPO60506 623 aaKnown RBP11.67□□□□□ -0.54
KARS-207ENST00000566560 NEBLO76041 1014 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 CD160O95971 181 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 VAV1P15498 845 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 ATP5OP48047 213 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 EIF3EP60228 445 aaKnown RBP11.67□□□□□ -0.54
KARS-207ENST00000566560 RHOAP61586 193 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 MTAPQ13126 283 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 RFTN1Q14699 578 aaPredicted RBP11.67□□□□□ -0.54
KARS-207ENST00000566560 LBRQ14739 615 aaKnown RBP11.67□□□□□ -0.54
KARS-207ENST00000566560 DLG2Q15700 870 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 HNRNPA1L2Q32P51 320 aaKnown RBP11.67□□□□□ -0.54
KARS-207ENST00000566560 SLC45A4Q5BKX6 768 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 SYT13Q7L8C5 426 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 RETREG3Q86VR2 466 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 BBS5Q8N3I7 341 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 RASGEF1CQ8N431 466 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 SPEM1Q8N4L4 309 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 PCDH20Q8N6Y1 951 aaKnown RBP11.67□□□□□ -0.54
KARS-207ENST00000566560 TMEM105Q8N8V8 129 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 FRS2Q8WU20 508 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 MAIP1Q8WWC4 291 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 ATG4AQ8WYN0 398 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 ERLEC1Q96DZ1 483 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 MS4A14Q96JA4 679 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 CCDC114Q96M63 670 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 TSGA13Q96PP4 275 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 TM6SF2Q9BZW4 377 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 TNKS2Q9H2K2 1166 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 MTG2Q9H4K7 406 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 SPATA6Q9NWH7 488 aaPredicted RBP11.67□□□□□ -0.54
KARS-207ENST00000566560 SEPT10Q9P0V9 454 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 SEPT3Q9UH03 358 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 R3HDM2Q9Y2K5 976 aaKnown RBP11.67□□□□□ -0.54
KARS-207ENST00000566560 SAR1BQ9Y6B6 198 aa11.67□□□□□ -0.54
KARS-207ENST00000566560 ZNF318Q5VUA4 2279 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 TCRBV21S2A2A0A5A6 115 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 HACD1B0YJ81 288 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 KCNK1O00180 336 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 MATN3O15232 486 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 SIN3BO75182 1162 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 IGSF6O95976 241 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 PEX11BO96011 259 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 RBP3P10745 1247 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 CCNCP24863 283 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 MMP13P45452 471 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 RECQLP46063 649 aaPredicted RBP11.66□□□□□ -0.54
KARS-207ENST00000566560 CCR3P51677 355 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 IFI35P80217 286 aaPredicted RBP11.66□□□□□ -0.54
KARS-207ENST00000566560 ZNF33AQ06730 810 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 SLC10A7Q0GE19 358 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 ZBTB17Q13105 803 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 XRCC4Q13426 336 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 ELAVL3Q14576 367 aaKnown RBP11.66□□□□□ -0.54
KARS-207ENST00000566560 CRY1Q16526 586 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 INO80DQ53TQ3 878 aaPredicted RBP11.66□□□□□ -0.54
KARS-207ENST00000566560 HEATR6Q6AI08 1181 aaKnown RBP11.66□□□□□ -0.54
KARS-207ENST00000566560 B4GALNT4Q76KP1 1039 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 CACUL1Q86Y37 369 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 TSTD1Q8NFU3 115 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 MAML1Q92585 1016 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 ZNF592Q92610 1267 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 FATE1Q969F0 183 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 ZNF419Q96HQ0 510 aaPredicted RBP11.66□□□□□ -0.54
KARS-207ENST00000566560 EXOC2Q96KP1 924 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 CAPZA3Q96KX2 299 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 GDAP1L1Q96MZ0 367 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 HHIPQ96QV1 700 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 NAP1L3Q99457 506 aaPredicted RBP11.66□□□□□ -0.54
KARS-207ENST00000566560 USB1Q9BQ65 265 aaKnown RBP11.66□□□□□ -0.54
KARS-207ENST00000566560 FRMD8P1Q9BZ68 369 aaPredicted RBP11.66□□□□□ -0.54
KARS-207ENST00000566560 HAUS2Q9NVX0 235 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 POLR3BQ9NW08 1133 aaPredicted RBP11.66□□□□□ -0.54
KARS-207ENST00000566560 C2orf42Q9NWW7 574 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 SMARCAL1Q9NZC9 954 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms