RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ADAM18Q9Y3Q7 739 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 PCDHGB5Q9Y5G0 923 aa5.34□□□□□ -1.55
CNOT1-209ENST00000566240 PASKQ96RG2 1323 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 FRMD3A2A2Y4 597 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 TTC36A6NLP5 189 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 LRRC53A6NM62 1247 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 EIF3CLB5ME19 914 aaKnown RBP5.33□□□□□ -1.56
CNOT1-209ENST00000566240 C1QTNF3-AMACRE9PGA6 284 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 MSI1O43347 362 aaKnown RBP5.33□□□□□ -1.56
CNOT1-209ENST00000566240 LIASO43766 372 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 NARSO43776 548 aaKnown RBP5.33□□□□□ -1.56
CNOT1-209ENST00000566240 USP12O75317 370 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 BEST1O76090 585 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 DDAH2O95865 285 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 DNTTP04053 509 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 CHRM5P08912 532 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-209ENST00000566240 ST6GAL1P15907 406 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 POU1F1P28069 291 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 TACR3P29371 465 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 GARSP41250 739 aaKnown RBP5.33□□□□□ -1.56
CNOT1-209ENST00000566240 EFNA5P52803 228 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 PRAMEP78395 509 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 FRG1Q14331 258 aaKnown RBP5.33□□□□□ -1.56
CNOT1-209ENST00000566240 DPCR1Q3MIW9 517 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 GPAT4Q86UL3 456 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 GGNQ86UU5 652 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 NEK9Q8TD19 979 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 GDPD5Q8WTR4 605 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 WDFY2Q96P53 400 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 TM2D2Q9BX73 214 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 STRA6Q9BX79 667 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 ZNF341Q9BYN7 854 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 GLIS2Q9BZE0 524 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-209ENST00000566240 CXorf56Q9H5V9 222 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 POLR1BQ9H9Y6 1135 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 CPNE5Q9HCH3 593 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 IL17RBQ9NRM6 502 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 NCKIPSDQ9NZQ3 722 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 A4GNTQ9UNA3 340 aa5.33□□□□□ -1.56
CNOT1-209ENST00000566240 CXorf65A6NEN9 183 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 PAGE4O60829 102 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 PGM3O95394 542 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 NFATC1O95644 943 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 HEXAP06865 529 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 WT1P19544 449 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-209ENST00000566240 CHRNA5P30532 468 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 GNAQP50148 359 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 ARSFP54793 590 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 YWHAZP63104 245 aaKnown RBP5.32□□□□□ -1.56
CNOT1-209ENST00000566240 STK4Q13043 487 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 GALNT3Q14435 633 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 ME3Q16798 604 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 PLEKHS1Q5SXH7 462 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 TMEM154Q6P9G4 183 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 SARM1Q6SZW1 724 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 KRT77Q7Z794 578 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 ARHGAP12Q8IWW6 846 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 ADGRF2Q8IZF7 708 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 ARL14EPQ8N8R7 260 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-209ENST00000566240 FAR1Q8WVX9 515 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 RITA1Q96K30 269 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 UROC1Q96N76 676 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 YME1L1Q96TA2 773 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 H2AFJQ9BTM1 129 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 MAK16Q9BXY0 300 aaKnown RBP5.32□□□□□ -1.56
CNOT1-209ENST00000566240 TOR3AQ9H497 397 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 SH2D4AQ9H788 454 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 FBRSL1Q9HCM7 1045 aaKnown RBP5.32□□□□□ -1.56
CNOT1-209ENST00000566240 MLXIPLQ9NP71 852 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 SLC17A6Q9P2U8 582 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 NFKBIL1Q9UBC1 381 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-209ENST00000566240 IPO11Q9UI26 975 aaKnown RBP5.32□□□□□ -1.56
CNOT1-209ENST00000566240 SLC8A2Q9UPR5 921 aa5.32□□□□□ -1.56
CNOT1-209ENST00000566240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.32□□□□□ -1.56
CNOT1-209ENST00000566240 MST1RQ04912 1400 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 ADGRF5Q8IZF2 1346 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 A0A1W2PQ09 198 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 A0A1W2PQF6 199 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 NPIPB8E9PQR5 432 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 SMIM22K7EJ46 135 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 SNAP23O00161 211 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 ERAL1O75616 437 aaKnown RBP5.31□□□□□ -1.56
CNOT1-209ENST00000566240 OR2C1O95371 312 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 PLAUP00749 431 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 ADRB2P07550 413 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 IRF1P10914 325 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 INSRRP14616 1297 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 SLC2A4P14672 509 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 GCH1P30793 250 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 HOXA7P31268 230 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-209ENST00000566240 CACNA2D1P54289 1103 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 CEBPZQ03701 1054 aaKnown RBP5.31□□□□□ -1.56
CNOT1-209ENST00000566240 AIMP2Q13155 320 aaKnown RBP5.31□□□□□ -1.56
CNOT1-209ENST00000566240 VEPH1Q14D04 833 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 CERKLQ49MI3 558 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-209ENST00000566240 KIAA1755Q5JYT7 1200 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 AKNAD1Q5T1N1 836 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 TXNDC8Q6A555 127 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 IGFL4Q6B9Z1 124 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 CHST9Q7L1S5 443 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms