RNA–Protein interactions for RNA: ENST00000565982.1

TM6SF1-208, Transcript of transmembrane 6 superfamily member 1, human

TSL 3

Gene TM6SF1, Length 856 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM6SF1-208	ENST00000565982	CEP41	Q9BYV8	373 aa		27.58	■■■□□ 2.01
TM6SF1-208	ENST00000565982	RAB6B	Q9NRW1	208 aa		27.58	■■■□□ 2.01
TM6SF1-208	ENST00000565982	AAR2	Q9Y312	384 aa	Known RBP	27.58	■■■□□ 2.01
TM6SF1-208	ENST00000565982	TTLL3	Q9Y4R7	772 aa		27.58	■■■□□ 2.01
TM6SF1-208	ENST00000565982	TICRR	Q7Z2Z1	1910 aa		27.58	■■■□□ 2.01
TM6SF1-208	ENST00000565982	KIAA1549L	Q6ZVL6	1849 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	IGSF6	O95976	241 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	HNRNPL	P14866	589 aa	Known RBP eCLIP	27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	RECQL	P46063	649 aa	Predicted RBP	27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	SNRPD1	P62314	119 aa	Known RBP	27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	MESP2	Q0VG99	397 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	PON2	Q15165	354 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	SLC14A2	Q15849	920 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	ACCSL	Q4AC99	568 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	FNDC3B	Q53EP0	1204 aa	Known RBP	27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	DUPD1	Q68J44	220 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	NAIF1	Q69YI7	327 aa	Predicted RBP	27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	C22orf39	Q6P5X5	142 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	TXNDC11	Q6PKC3	985 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	TRMT11	Q7Z4G4	463 aa	Known RBP	27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	IFT20	Q8IY31	132 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	TSEN2	Q8NCE0	465 aa	Known RBP	27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	CYB5D2	Q8WUJ1	264 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	GDAP1L1	Q96MZ0	367 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	FAM129A	Q9BZQ8	928 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	ARHGEF3	Q9NR81	526 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	THAP10	Q9P2Z0	257 aa	Predicted RBP	27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	FBXL21	Q9UKT6	434 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	COL4A2	P08572	1712 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	C5orf42	Q9H799	3197 aa		27.57	■■■□□ 2
TM6SF1-208	ENST00000565982	ERI2	A8K979	691 aa	Known RBP	27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	GSR	P00390	522 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	TUBB	P07437	444 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	RHOXF2B	P0C7M4	288 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	ITIH2	P19823	946 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	NFKB1	P19838	968 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	VPS41	P49754	854 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	STK19	P49842	368 aa	Predicted RBP	27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	NRL	P54845	237 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	CALCOCO2	Q13137	446 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	DLG2	Q15700	870 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	PTPRN	Q16849	979 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	NUDCD1	Q96RS6	583 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	RHOXF2	Q9BQY4	288 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	VPS45	Q9NRW7	570 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	FAM114A2	Q9NRY5	505 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	WHRN	Q9P202	907 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	LHX3	Q9UBR4	397 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	SLCO3A1	Q9UIG8	710 aa		27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	FCF1	Q9Y324	198 aa	Known RBP	27.56	■■■□□ 2
TM6SF1-208	ENST00000565982	FARP1	Q9Y4F1	1045 aa	Predicted RBP	27.56	■■■□□ 2
TM6SF1-208	ENST00000565982		E7EVH7	732 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982		K7ERQ8	282 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	MCM3	P25205	808 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	CD68	P34810	354 aa	Predicted RBP	27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	GEM	P55040	296 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	AP1S1	P61966	158 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	CDK16	Q00536	496 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	SLC7A5	Q01650	507 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	GUCY2D	Q02846	1103 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	CAV1	Q03135	178 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	RAD51	Q06609	339 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	SEMA5A	Q13591	1074 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	GRM3	Q14832	879 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	OR2AP1	Q8NGE2	309 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	SORCS1	Q8WY21	1168 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	SEC14L1	Q92503	715 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	IMP4	Q96G21	291 aa	Known RBP	27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	NELL2	Q99435	816 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	FBRSL1	Q9HCM7	1045 aa	Known RBP	27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	SCUBE2	Q9NQ36	999 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	SUN2	Q9UH99	717 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	TPX2	Q9ULW0	747 aa	Known RBP	27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	ACTL7A	Q9Y615	435 aa		27.55	■■■□□ 2
TM6SF1-208	ENST00000565982	EYS	Q5T1H1	3165 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982		K7EQS6	105 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	DNALI1	O14645	258 aa	Predicted RBP	27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	SMAD6	O43541	496 aa	Known RBP	27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	PSMB4	P28070	264 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	BASP1	P80723	227 aa	Known RBP	27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	MRPS25	P82663	173 aa	Known RBP	27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	MRPS21	P82921	87 aa	Known RBP	27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	ZNF234	Q14588	700 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	HSF5	Q4G112	596 aa	Predicted RBP	27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	SDE2	Q6IQ49	451 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	FSTL4	Q6MZW2	842 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	SERPINA13P	Q6UXR4	307 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	PRUNE1	Q86TP1	453 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	PGBD5	Q8N414	524 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	ZNF419	Q96HQ0	510 aa	Predicted RBP	27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	SEMA3C	Q99985	751 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	TRIM31	Q9BZY9	425 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	ETNK1	Q9HBU6	452 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	EPB41L5	Q9HCM4	733 aa		27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	EIF2B3	Q9NR50	452 aa	Known RBP	27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	DMGDH	Q9UI17	866 aa	Known RBP	27.54	■■■□□ 2
TM6SF1-208	ENST00000565982	EDDM13	A0A1B0GTR0	161 aa		27.53	■■■□□ 2
TM6SF1-208	ENST00000565982	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	27.53	■■■□□ 2
TM6SF1-208	ENST00000565982	INSIG1	O15503	277 aa		27.53	■■■□□ 2
TM6SF1-208	ENST00000565982	METTL18	O95568	372 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms