RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 OR10H2O60403 315 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 ZSCAN5DPP0CG00 497 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 HDCP19113 662 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 FGFR3P22607 806 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 KDELR1P24390 212 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 IDH2P48735 452 aaKnown RBP13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 DGUOKQ16854 277 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 SLC45A4Q5BKX6 768 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 PCID2Q5JVF3 399 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 SPANXN2Q5MJ10 180 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 STXBP5Q5T5C0 1151 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 NPNTQ6UXI9 565 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 NIPA1Q7RTP0 329 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 ARMC8Q8IUR7 673 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 PSTKQ8IV42 348 aaKnown RBP13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 DENND1CQ8IV53 801 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 SMYD1Q8NB12 490 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 STAG3L4Q8TBR4 150 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 SLC35C1Q96A29 364 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 DGCR6LQ9BY27 220 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 TM6SF2Q9BZW4 377 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 AASDHPPTQ9NRN7 309 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 SAE1Q9UBE0 346 aaPredicted RBP13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 ANAPC2Q9UJX6 822 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 SNX6Q9UNH7 406 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 FGF10O15520 208 aaPredicted RBP13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 PROCP04070 461 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 HOXB8P17481 243 aaPredicted RBP13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 ACAP1Q15027 740 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 TAF5Q15542 800 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 LLGL2Q6P1M3 1020 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 SERPINA13PQ6UXR4 307 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 TTC7BQ86TV6 843 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 MARK4Q96L34 752 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 CHST7Q9NS84 486 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 SLC12A4Q9UP95 1085 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 TRDMT1O14717 391 aaKnown RBP13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 SP100P23497 879 aaPredicted RBP13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 CRADDP78560 199 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 LPIN1Q14693 890 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 GPAT3Q53EU6 434 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 ALKBH2Q6NS38 261 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 CXCL17Q6UXB2 119 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 MPP4Q96JB8 637 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 MYLK2Q9H1R3 596 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 DNAJC18Q9H819 358 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 EVA1BQ9NVM1 165 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 MSRAQ9UJ68 235 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 TISP43B9A030 160 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 EML1O00423 815 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 FFAR3O14843 346 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 GPR42O15529 346 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 TBL1XO60907 577 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 LTA4HP09960 611 aaKnown RBP13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 CXCR2P25025 360 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 ADRA1DP25100 572 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 DGCR6Q14129 220 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 MAP4K3Q8IVH8 894 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 OR52L1Q8NGH7 329 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 UBE2E3Q969T4 207 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 NOL6Q9H6R4 1146 aaKnown RBP13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 MRPS23Q9Y3D9 190 aaKnown RBP13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 DEPDC5O75140 1603 aa13.76□□□□□ -0.21
CX3CL1-204ENST00000565912 CBX6O95503 412 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 TRUB2O95900 331 aaKnown RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 CCDC166P0CW27 439 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 EML3Q32P44 896 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 INO80DQ53TQ3 878 aaPredicted RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 LRRC74BQ6ZQY2 392 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 GRIP2Q9C0E4 1043 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 ASAH2Q9NR71 780 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 POLE3Q9NRF9 147 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 DDX18Q9NVP1 670 aaKnown RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.75□□□□□ -0.211e-6■■□□□ 12.2
CX3CL1-204ENST00000565912 FRMPD4Q14CM0 1322 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 PEX11AO75192 247 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 FAM153BP0C7A2 387 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 CLK3P49761 638 aaKnown RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 SRP54P61011 504 aaKnown RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 FAM153CQ494X1 144 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 TMEM119Q4V9L6 283 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 PMF1Q6P1K2 205 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 FOXR1Q6PIV2 292 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 KYAT3Q6YP21 454 aaKnown RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 EIF3MQ7L2H7 374 aaKnown RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 PEG10Q86TG7 708 aaKnown RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 KLHL23Q8NBE8 558 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 FAIM2Q9BWQ8 316 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 IL22Q9GZX6 179 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 POLR1BQ9H9Y6 1135 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 ZMYM2Q9UBW7 1377 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 VWDEQ8N2E2 1590 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 TNFAIP8O95379 198 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 CALCAP01258 141 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 ZNF135P52742 658 aaPredicted RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 CDK16Q00536 496 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 INTS11Q5TA45 600 aaKnown RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 ISLR2Q6UXK2 745 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 PTGR2Q8N8N7 351 aaPredicted RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 ATXN2LQ8WWM7 1075 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms