RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 DTLQ9NZJ0 730 aa26.43■■□□□ 1.82
NME3-208ENST00000565379 MBD1Q9UIS9 605 aaPredicted RBP26.43■■□□□ 1.82
NME3-208ENST00000565379 MFHAS1Q9Y4C4 1052 aa26.43■■□□□ 1.82
NME3-208ENST00000565379 CES2O00748 559 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 ENC1O14682 589 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 PRAMEF11O60813 436 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 ZNF806P0C7X5 589 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 HOXB2P14652 356 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 NTSR1P30989 418 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 GARSP41250 739 aaKnown RBP26.42■■□□□ 1.82
NME3-208ENST00000565379 ETF1P62495 437 aaKnown RBP26.42■■□□□ 1.82
NME3-208ENST00000565379 DYNLT1P63172 113 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 CREB5Q02930 508 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 GBE1Q04446 702 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 ZNF234Q14588 700 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 ELF2Q15723 593 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 FNDC3BQ53EP0 1204 aaKnown RBP26.42■■□□□ 1.82
NME3-208ENST00000565379 INO80DQ53TQ3 878 aaPredicted RBP26.42■■□□□ 1.82
NME3-208ENST00000565379 TIGD7Q6NT04 549 aaPredicted RBP26.42■■□□□ 1.82
NME3-208ENST00000565379 CHPFQ8IZ52 775 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 C17orf53Q8N3J3 647 aaPredicted RBP26.42■■□□□ 1.82
NME3-208ENST00000565379 CYB5D2Q8WUJ1 264 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 MAIP1Q8WWC4 291 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 SORCS1Q8WY21 1168 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 FATE1Q969F0 183 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 MRGPRX3Q96LB0 322 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 ZNF599Q96NL3 588 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 HEMGNQ9BXL5 484 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 SLC6A17Q9H1V8 727 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 SP110Q9HB58 689 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 CD248Q9HCU0 757 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 BCCIPQ9P287 314 aaKnown RBP eCLIP26.42■■□□□ 1.82
NME3-208ENST00000565379 SUN2Q9UH99 717 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 IPO11Q9UI26 975 aaKnown RBP26.42■■□□□ 1.82
NME3-208ENST00000565379 HEY1Q9Y5J3 304 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 CHD5Q8TDI0 1954 aa26.42■■□□□ 1.82
NME3-208ENST00000565379 CTAGE9A4FU28 777 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 WASH3PC4AMC7 463 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 PPP1R12AO14974 1030 aaPredicted RBP26.41■■□□□ 1.82
NME3-208ENST00000565379 SNAP91O60641 907 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 ZNF189O75820 626 aaPredicted RBP26.41■■□□□ 1.82
NME3-208ENST00000565379 ATP1A1P05023 1023 aaKnown RBP26.41■■□□□ 1.82
NME3-208ENST00000565379 PRLRP16471 622 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 TCP1P17987 556 aaKnown RBP26.41■■□□□ 1.82
NME3-208ENST00000565379 GABRG2P18507 467 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 P2RY2P41231 377 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 ARF5P84085 180 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 RFTN1Q14699 578 aaPredicted RBP26.41■■□□□ 1.82
NME3-208ENST00000565379 AASDHQ4L235 1098 aaPredicted RBP26.41■■□□□ 1.82
NME3-208ENST00000565379 SERPINA13PQ6UXR4 307 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 NSMCE1Q8WV22 266 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 HDAC11Q96DB2 347 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 TSGA13Q96PP4 275 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 GABRG3Q99928 467 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 CEP44Q9C0F1 390 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 TMEM245Q9H330 911 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 POLMQ9NP87 494 aaPredicted RBP26.41■■□□□ 1.82
NME3-208ENST00000565379 SNX12Q9UMY4 172 aa26.41■■□□□ 1.82
NME3-208ENST00000565379 NUP205Q92621 2012 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 ATP9BO43861 1147 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 ALDH1A2O94788 518 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 CCNCP24863 283 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 CTSOP43234 321 aaPredicted RBP26.4■■□□□ 1.82
NME3-208ENST00000565379 SERPINH1P50454 418 aaKnown RBP26.4■■□□□ 1.82
NME3-208ENST00000565379 LIMK1P53667 647 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 MAP7D1Q3KQU3 841 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 ARMCX6Q7L4S7 300 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 PGBD3Q8N328 593 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 SH2D3CQ8N5H7 860 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 C12orf50Q8NA57 414 aaPredicted RBP26.4■■□□□ 1.82
NME3-208ENST00000565379 ATP11CQ8NB49 1132 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 WDR24Q96S15 920 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 CD93Q9NPY3 652 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 UBA2Q9UBT2 640 aaPredicted RBP26.4■■□□□ 1.82
NME3-208ENST00000565379 STON1Q9Y6Q2 735 aa26.4■■□□□ 1.82
NME3-208ENST00000565379 BCLAF3A2AJT9 711 aaKnown RBP26.39■■□□□ 1.82
NME3-208ENST00000565379 KIF2AO00139 706 aaPredicted RBP26.39■■□□□ 1.82
NME3-208ENST00000565379 RHOBTB1O94844 696 aa26.39■■□□□ 1.82
NME3-208ENST00000565379 GLDCP23378 1020 aa26.39■■□□□ 1.82
NME3-208ENST00000565379 ADCY2Q08462 1091 aa26.39■■□□□ 1.82
NME3-208ENST00000565379 SLC10A2Q12908 348 aaPredicted RBP26.39■■□□□ 1.82
NME3-208ENST00000565379 KLF1Q13351 362 aaPredicted RBP26.39■■□□□ 1.82
NME3-208ENST00000565379 XRCC4Q13426 336 aa26.39■■□□□ 1.82
NME3-208ENST00000565379 PAPD7Q5XG87 772 aaKnown RBP26.39■■□□□ 1.82
NME3-208ENST00000565379 AADACL2Q6P093 401 aa26.39■■□□□ 1.82
NME3-208ENST00000565379 NYAP1Q6ZVC0 841 aa26.39■■□□□ 1.82
NME3-208ENST00000565379 ZSCAN30Q86W11 494 aa26.39■■□□□ 1.82
NME3-208ENST00000565379 SLC13A5Q86YT5 568 aaPredicted RBP26.39■■□□□ 1.82
NME3-208ENST00000565379 ISG20Q96AZ6 181 aaKnown RBP26.39■■□□□ 1.82
NME3-208ENST00000565379 RPL10LQ96L21 214 aaKnown RBP26.39■■□□□ 1.82
NME3-208ENST00000565379 OLFM3Q96PB7 478 aa26.39■■□□□ 1.82
NME3-208ENST00000565379 NAP1L3Q99457 506 aaPredicted RBP26.39■■□□□ 1.82
NME3-208ENST00000565379 FRMD8P1Q9BZ68 369 aaPredicted RBP26.39■■□□□ 1.82
NME3-208ENST00000565379 PDFQ9HBH1 243 aa26.39■■□□□ 1.82
NME3-208ENST00000565379 PCDHGA5Q9Y5G8 931 aa26.39■■□□□ 1.82
NME3-208ENST00000565379 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.38■■□□□ 1.81
NME3-208ENST00000565379 HACD1B0YJ81 288 aa26.38■■□□□ 1.81
NME3-208ENST00000565379 PATE3B3GLJ2 98 aa26.38■■□□□ 1.81
NME3-208ENST00000565379 CEP104O60308 925 aa26.38■■□□□ 1.81
NME3-208ENST00000565379 MAFKO60675 156 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms