RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ZDHHC7Q9NXF8 308 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 SEPT3Q9UH03 358 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 SOX13Q9UN79 622 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 FAM169AQ9Y6X4 670 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.85■□□□□ 0.77
CLN6-205ENST00000564846 LEFTY2O00292 366 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 LUC7L3O95232 432 aaKnown RBP19.85■□□□□ 0.77
CLN6-205ENST00000564846 RHOP08100 348 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 AVPR1AP37288 418 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 CD86P42081 329 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 MPP7Q5T2T1 576 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 GPR158Q5T848 1215 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 DENND5AQ6IQ26 1287 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 PGBD5Q8N414 524 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 CARNMT1Q8N4J0 409 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.85■□□□□ 0.77
CLN6-205ENST00000564846 ARRDC2Q8TBH0 407 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 TADA1Q96BN2 335 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 KIFC1Q9BW19 673 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 MUC3BQ9H195 1237 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 TASP1Q9H6P5 420 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 ARNT2Q9HBZ2 717 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 PPANQ9NQ55 473 aaKnown RBP19.85■□□□□ 0.77
CLN6-205ENST00000564846 UBA2Q9UBT2 640 aaPredicted RBP19.85■□□□□ 0.77
CLN6-205ENST00000564846 SMG5Q9UPR3 1016 aaKnown RBP19.85■□□□□ 0.77
CLN6-205ENST00000564846 DENND4CQ5VZ89 1909 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 SCAMP3O14828 347 aaKnown RBP19.85■□□□□ 0.77
CLN6-205ENST00000564846 KRT37O76014 449 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 MMP2P08253 660 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 TPH1P17752 444 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 GBP2P32456 591 aaPredicted RBP19.85■□□□□ 0.77
CLN6-205ENST00000564846 SLC18A1P54219 525 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 DSC2Q02487 901 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 MGAT5Q09328 741 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 ANKRD20A4Q4UJ75 823 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 PCID2Q5JVF3 399 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 ALG1LQ6GMV1 187 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 POTEHQ6S545 545 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 LEKR1Q6ZMV7 388 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 CMTM8Q8IZV2 173 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 PTCD2Q8WV60 388 aaKnown RBP19.85■□□□□ 0.77
CLN6-205ENST00000564846 CERS2Q96G23 380 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 PSKH2Q96QS6 385 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 SSU72Q9NP77 194 aaKnown RBP19.85■□□□□ 0.77
CLN6-205ENST00000564846 ZMYM5Q9UJ78 669 aa19.85■□□□□ 0.77
CLN6-205ENST00000564846 CHD5Q8TDI0 1954 aa19.84■□□□□ 0.77
CLN6-205ENST00000564846 E2F8A0AVK6 867 aa19.84■□□□□ 0.77
CLN6-205ENST00000564846 PRPF4O43172 522 aaKnown RBP eCLIP19.84■□□□□ 0.773e-7■■■■□ 23.9
CLN6-205ENST00000564846 MOSPD3O75425 235 aa19.84■□□□□ 0.77
CLN6-205ENST00000564846 SERPINB9P50453 376 aa19.84■□□□□ 0.77
CLN6-205ENST00000564846 TEAD2Q15562 447 aa19.84■□□□□ 0.77
CLN6-205ENST00000564846 MPPE1Q53F39 396 aa19.84■□□□□ 0.77
CLN6-205ENST00000564846 MARK2Q7KZI7 788 aaKnown RBP19.84■□□□□ 0.77
CLN6-205ENST00000564846 BBS7Q8IWZ6 715 aa19.84■□□□□ 0.77
CLN6-205ENST00000564846 TDRD5Q8NAT2 981 aaKnown RBP19.84■□□□□ 0.77
CLN6-205ENST00000564846 TTC16Q8NEE8 873 aa19.84■□□□□ 0.77
CLN6-205ENST00000564846 ZNF669Q96BR6 464 aaPredicted RBP19.84■□□□□ 0.77
CLN6-205ENST00000564846 ALKBH8Q96BT7 664 aaKnown RBP19.84■□□□□ 0.77
CLN6-205ENST00000564846 TCEAL4Q96EI5 215 aa19.84■□□□□ 0.77
CLN6-205ENST00000564846 FCRL3Q96P31 734 aaPredicted RBP19.84■□□□□ 0.77
CLN6-205ENST00000564846 PRKD2Q9BZL6 878 aa19.84■□□□□ 0.77
CLN6-205ENST00000564846 YBX2Q9Y2T7 364 aaKnown RBP19.84■□□□□ 0.77
CLN6-205ENST00000564846 ZCWPW2A0A1B0GU75 182 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 A0A1W2PPM1 405 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 FAM47DPA6NHR8 397 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 CBX4O00257 560 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 PER2O15055 1255 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 KRT38O76015 456 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 SNRPAP09012 282 aaKnown RBP19.83■□□□□ 0.77
CLN6-205ENST00000564846 KRT4P19013 534 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 CNTFP26441 200 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 PPARDQ03181 441 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 CDH18Q13634 790 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 PCSK7Q16549 785 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 SH3RF2Q8TEC5 729 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 ATXN2LQ8WWM7 1075 aaKnown RBP19.83■□□□□ 0.77
CLN6-205ENST00000564846 MTBPQ96DY7 904 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 SEMA3CQ99985 751 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 MGME1Q9BQP7 344 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 CINPQ9BW66 212 aaPredicted RBP19.83■□□□□ 0.77
CLN6-205ENST00000564846 MRM3Q9HC36 420 aaKnown RBP19.83■□□□□ 0.77
CLN6-205ENST00000564846 CHRAC1Q9NRG0 131 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 NKIRAS1Q9NYS0 192 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 HCFC2Q9Y5Z7 792 aa19.83■□□□□ 0.77
CLN6-205ENST00000564846 MT-ND3P03897 115 aa19.83■□□□□ 0.76
CLN6-205ENST00000564846 SLC14A2Q15849 920 aa19.83■□□□□ 0.76
CLN6-205ENST00000564846 FSCBQ5H9T9 825 aa19.83■□□□□ 0.76
CLN6-205ENST00000564846 PKN3Q6P5Z2 889 aa19.83■□□□□ 0.76
CLN6-205ENST00000564846 CES3Q6UWW8 571 aa19.83■□□□□ 0.76
CLN6-205ENST00000564846 UNC5BQ8IZJ1 945 aa19.83■□□□□ 0.76
CLN6-205ENST00000564846 PPHLN1Q8NEY8 458 aaKnown RBP19.83■□□□□ 0.76
CLN6-205ENST00000564846 DDI1Q8WTU0 396 aa19.83■□□□□ 0.76
CLN6-205ENST00000564846 SGSM3Q96HU1 749 aa19.83■□□□□ 0.76
CLN6-205ENST00000564846 KIF9Q9HAQ2 790 aa19.83■□□□□ 0.76
CLN6-205ENST00000564846 LAMA2P24043 3122 aaKnown RBP19.82■□□□□ 0.76
CLN6-205ENST00000564846 ZNF197O14709 1029 aa19.82■□□□□ 0.76
CLN6-205ENST00000564846 MUSKO15146 869 aa19.82■□□□□ 0.76
CLN6-205ENST00000564846 FAM155BO75949 473 aa19.82■□□□□ 0.76
CLN6-205ENST00000564846 GLDCP23378 1020 aa19.82■□□□□ 0.76
CLN6-205ENST00000564846 PRSS36Q5K4E3 855 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms