RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 POLD3Q15054 466 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 POM121L1PQ3SYA9 428 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 MANEALQ5VSG8 457 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 FBXL19Q6PCT2 694 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 DHRS13Q6UX07 377 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 NLRP14Q86W24 1093 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 CHST14Q8NCH0 376 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 NEK11Q8NG66 645 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 CASKIN2Q8WXE0 1202 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 LENG8Q96PV6 779 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 ERGIC2Q96RQ1 377 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 NLRC4Q9NPP4 1024 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 TMPRSS4Q9NRS4 437 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 HECAQ9UBI9 543 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 LHX6Q9UPM6 363 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 GPSM3Q9Y4H4 160 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 WASF2Q9Y6W5 498 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 SPEGQ15772 3267 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 DSPP15924 2871 aaKnown RBP12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 APC2O95996 2303 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 FREM2Q5SZK8 3169 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 ANKRD62A6NC57 917 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 NEMP2A6NFY4 417 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 TSPAN6O43657 245 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 POP4O95707 220 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 GSRP00390 522 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 THEGLP0DJG4 465 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 ADRB3P13945 408 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 DESP17661 470 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 GPD1P21695 349 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 GLDCP23378 1020 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 ACADVLP49748 655 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 DNA2P51530 1060 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 SNRPD1P62314 119 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 UBXN1Q04323 297 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 RAD51Q06609 339 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 C1QBPQ07021 282 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 CYP4F3Q08477 520 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 PTP4A2Q12974 167 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 CLEC16AQ2KHT3 1053 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 C15orf59Q2T9L4 293 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 TMEM259Q4ZIN3 620 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 INO80DQ53TQ3 878 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 RWDD4Q6NW29 188 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 ABI3BPQ7Z7G0 1075 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 SLFN11Q7Z7L1 901 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 DRC7Q8IY82 874 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 EMC1Q8N766 993 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 C3orf20Q8ND61 904 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 SLC30A5Q8TAD4 765 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 FAM172AQ8WUF8 416 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 RFFLQ8WZ73 363 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 ARHGEF2Q92974 986 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 TBC1D31Q96DN5 1066 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 ARHGEF26Q96DR7 871 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 PCMTD1Q96MG8 357 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 C11orf70Q9BRQ4 267 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 SELENOOQ9BVL4 669 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 OSBPL1AQ9BXW6 950 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 SLC17A9Q9BYT1 436 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 NRSN2Q9GZP1 204 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 TNKS2Q9H2K2 1166 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 USP29Q9HBJ7 922 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 WDFY3Q8IZQ1 3526 aa12.41□□□□□ -0.42
GTF3C1-204ENST00000564664 A6NNZ2 444 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 EPHB6O15197 1021 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 KDELR3O43731 214 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 RAMP2O60895 175 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 LRIG2O94898 1065 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 CD160O95971 181 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 ALPPL2P10696 532 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 DGKAP23743 735 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 HTR7P34969 479 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 RFC1P35251 1148 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 KLK7P49862 253 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 CCNHP51946 323 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 ZNF143P52747 638 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 HDAC4P56524 1084 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 YBEYP58557 167 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 SGCGQ13326 291 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 STX1AQ16623 288 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 CDO1Q16878 200 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 MYLK3Q32MK0 819 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 PROX2Q3B8N5 592 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 CCDC157Q569K6 752 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 ZNF805Q5CZA5 627 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 WDR59Q6PJI9 974 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 OR4C6Q8NH72 309 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 MDM1Q8TC05 714 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 GRIN3AQ8TCU5 1115 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 GPT2Q8TD30 523 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 HCAR2Q8TDS4 363 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 VCPIP1Q96JH7 1222 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 PCDHB18PQ96TA0 734 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 AGPAT1Q99943 283 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 DUSP23Q9BVJ7 150 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 EVA1BQ9NVM1 165 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 MYO6Q9UM54 1294 aa12.4□□□□□ -0.42
GTF3C1-204ENST00000564664 ZFR2Q9UPR6 939 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms