RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 ZDHHC4Q9NPG8 344 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 ANLNQ9NQW6 1124 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 EIF2B3Q9NR50 452 aaKnown RBP9.95□□□□□ -0.82
UBFD1-203ENST00000564106 TMPRSS4Q9NRS4 437 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 RAB6BQ9NRW1 208 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 RXFP3Q9NSD7 469 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 ETNK2Q9NVF9 386 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 SMPD4Q9NXE4 827 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 GOLGA6AQ9NYA3 693 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 DLL3Q9NYJ7 618 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 NUDT5Q9UKK9 219 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 HS3ST4Q9Y661 456 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 ABCA7Q8IZY2 2146 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 IGLV3-10A0A075B6K4 115 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 ERI2A8K979 691 aaKnown RBP9.94□□□□□ -0.82
UBFD1-203ENST00000564106 F5H5T6 163 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 AP3B1O00203 1094 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 RNF103O00237 685 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 LEFTY2O00292 366 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 TRDMT1O14717 391 aaKnown RBP9.94□□□□□ -0.82
UBFD1-203ENST00000564106 RIPK2O43353 540 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 SPAG6O75602 509 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 TTC4O95801 387 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 OLFM2O95897 454 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 OAS1P00973 400 aaKnown RBP9.94□□□□□ -0.82
UBFD1-203ENST00000564106 CKMP06732 381 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 ABHD2P08910 425 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 CCNCP24863 283 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 DDX6P26196 483 aaKnown RBP eCLIP9.94□□□□□ -0.82
UBFD1-203ENST00000564106 OAS2P29728 719 aaKnown RBP9.94□□□□□ -0.82
UBFD1-203ENST00000564106 GGCXP38435 758 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 SLC6A11P48066 632 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 MAPKAPK2P49137 400 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 CBLBQ13191 982 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 SEMA5AQ13591 1074 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 KCNJ11Q14654 390 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 UAP1Q16222 522 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-203ENST00000564106 MS4A13Q5J8X5 152 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 RABGAP1LQ5R372 815 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 ANKRD20A2Q5SQ80 823 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 ANKRD20A1Q5TYW2 823 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 TTC39BQ5VTQ0 682 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-203ENST00000564106 ANKRD20A3Q5VUR7 823 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 PRR23BQ6ZRT6 265 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 CHSY1Q86X52 802 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 CCDC13Q8IYE1 715 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 MCUQ8NE86 351 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 OSCP1Q8WVF1 389 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 FATE1Q969F0 183 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 LRRC39Q96DD0 335 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 TSGA13Q96PP4 275 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 HHIPQ96QV1 700 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 ROPN1BQ9BZX4 212 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-203ENST00000564106 ROPN1Q9HAT0 212 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-203ENST00000564106 XAB2Q9HCS7 855 aaKnown RBP9.94□□□□□ -0.82
UBFD1-203ENST00000564106 TMEM248Q9NWD8 314 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 NCDNQ9UBB6 729 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 XPO7Q9UIA9 1087 aaKnown RBP9.94□□□□□ -0.82
UBFD1-203ENST00000564106 ZMYM5Q9UJ78 669 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 HCN2Q9UL51 889 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 ARHGAP26Q9UNA1 814 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 NEU3Q9UQ49 428 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 CHD8Q9HCK8 2581 aa9.94□□□□□ -0.82
UBFD1-203ENST00000564106 TRAV19A0A0A6YYK7 116 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 TYW5A2RUC4 315 aaKnown RBP9.93□□□□□ -0.82
UBFD1-203ENST00000564106 ARHGAP42A6NI28 874 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 SOBPA7XYQ1 873 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 HMGB1P1B2RPK0 211 aaPredicted RBP9.93□□□□□ -0.82
UBFD1-203ENST00000564106 TRIM24O15164 1050 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 PSMD3O43242 534 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 COCHO43405 550 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 ACSL4O60488 711 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 CYP17A1P05093 508 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 MLNP12872 115 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 ETS1P14921 441 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 HDCP19113 662 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 ATP5DP30049 168 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 MAGEA4P43358 317 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 LMAN1P49257 510 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 YBEYP58557 167 aaPredicted RBP9.93□□□□□ -0.82
UBFD1-203ENST00000564106 AUHQ13825 339 aaKnown RBP9.93□□□□□ -0.82
UBFD1-203ENST00000564106 LRRC32Q14392 662 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 PARP6Q2NL67 630 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 PARP15Q460N3 678 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 DNAJC21Q5F1R6 531 aaKnown RBP9.93□□□□□ -0.82
UBFD1-203ENST00000564106 DGKKQ5KSL6 1271 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 CEP85LQ5SZL2 805 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 PIK3R6Q5UE93 754 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 KBTBD6Q86V97 674 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 UMODL1-AS1Q8N2C9 162 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 FAM160A2Q8N612 972 aaPredicted RBP9.93□□□□□ -0.82
UBFD1-203ENST00000564106 ATP11CQ8NB49 1132 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 CCDC110Q8TBZ0 833 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 NSMCE1Q8WV22 266 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 MSANTD3Q96H12 275 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 RPRD1AQ96P16 312 aaPredicted RBP9.93□□□□□ -0.82
UBFD1-203ENST00000564106 LGMNQ99538 433 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 TMEM109Q9BVC6 243 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 MAGEB5Q9BZ81 275 aa9.93□□□□□ -0.82
UBFD1-203ENST00000564106 KIF9Q9HAQ2 790 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms