RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 STILQ15468 1287 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 BBS9Q3SYG4 887 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 CCDC14Q49A88 953 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 FSCBQ5H9T9 825 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 MTX3Q5HYI7 312 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 CELF3Q5SZQ8 465 aaKnown RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 TEDDM1Q5T9Z0 273 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 SLC9A4Q6AI14 798 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 CTRB2Q6GPI1 263 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 PTAR1Q7Z6K3 402 aaPredicted RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 SLC22A16Q86VW1 577 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 DSELQ8IZU8 1212 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 BEND7Q8N7W2 519 aaPredicted RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 TRPV1Q8NER1 839 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 TNIP2Q8NFZ5 429 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 ZSCAN18Q8TBC5 510 aaPredicted RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 CPT1BQ92523 772 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 LENG8Q96PV6 779 aaPredicted RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 CSF3RQ99062 836 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 IL12RB2Q99665 862 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 LXNQ9BS40 222 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 SLC4A5Q9BY07 1137 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 TUFT1Q9NNX1 390 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 HMG20AQ9NP66 347 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 AKIP1Q9NQ31 210 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 C12orf4Q9NQ89 552 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 PNPOQ9NVS9 261 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 GABBR1Q9UBS5 961 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 KCNN3Q9UGI6 736 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 SRRDQ9UH36 339 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 PCDHA10Q9Y5I2 948 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 KAT6AQ92794 2004 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 TCRBV7S3A2A0A539 114 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 WDR64B1ANS9 1081 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 ZNF195O14628 629 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 RFPL1O75677 317 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 TOP3BO95985 862 aaKnown RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 ZNF865P0CJ78 1059 aaPredicted RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 M6PRP20645 277 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 CES1P23141 567 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 BDNFP23560 247 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 ETFBP38117 255 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 DPP6P42658 865 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 QARSP47897 775 aaKnown RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 SLC26A2P50443 739 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 RAD23AP54725 363 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 RACK1P63244 317 aaKnown RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 GALK2Q01415 458 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 TNFAIP2Q03169 654 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 TTC39BQ5VTQ0 682 aaPredicted RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 IQSEC1Q6DN90 963 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 LLGL2Q6P1M3 1020 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 DRICH1Q6PGQ1 229 aaPredicted RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 KCNT2Q6UVM3 1135 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 ARCQ7LC44 396 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 CCDC60Q8IWA6 550 aaPredicted RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 FAM71AQ8IYT1 594 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 RAET1EQ8TD07 263 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 ACMSDQ8TDX5 336 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 AFG1LQ8WV93 481 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 GIMAP1Q8WWP7 306 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 PEX13Q92968 403 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 VPS35Q96QK1 796 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 DNAJC28Q9NX36 388 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 SNTG2Q9NY99 539 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 IPO11Q9UI26 975 aaKnown RBP9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 VPS28Q9UK41 221 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 PSME2Q9UL46 239 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 TCAF1Q9Y4C2 921 aa9.28□□□□□ -0.92
AC138869.3-201ENST00000563960 PLXNB2O15031 1838 aa9.27□□□□□ -0.92
AC138869.3-201ENST00000563960 STX16-NPEPL1H3BU86 382 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 EIF3DO15371 548 aaKnown RBP eCLIP9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 CFLARO15519 480 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 ASNA1O43681 348 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 IDH3BO43837 385 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 IL18RAPO95256 599 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 KRT6AP02538 564 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 KRT6BP04259 564 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 WEE2P0C1S8 567 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 HSPA1AP0DMV8 641 aaKnown RBP9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 HSPA1BP0DMV9 641 aaKnown RBP9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 KRT3P12035 628 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 NCAM1P13591 858 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 CKMT2P17540 419 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 PTPN9P43378 593 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 PRKAA2P54646 552 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 PRKCQQ04759 706 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 C19orf57Q0VDD7 668 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 SLC10A2Q12908 348 aaPredicted RBP9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 ACAD10Q6JQN1 1059 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 METTL7BQ6UX53 244 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 C16orf89Q6UX73 402 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 PIWIL3Q7Z3Z3 882 aaKnown RBP9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 HAUS6Q7Z4H7 955 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 KATNAL2Q8IYT4 538 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 TAB3Q8N5C8 712 aaPredicted RBP9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 NAT8LQ8N9F0 302 aa9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 ASCC1Q8N9N2 400 aaKnown RBP9.27□□□□□ -0.93
AC138869.3-201ENST00000563960 KYQ8NBH2 561 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms