RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 AWAT1Q58HT5 328 aa6.13□□□□□ -1.43
CHD9-205ENST00000562785 BEND3Q5T5X7 828 aa6.13□□□□□ -1.43
CHD9-205ENST00000562785 DENND1BQ6P3S1 775 aa6.13□□□□□ -1.43
CHD9-205ENST00000562785 DNAJC10Q8IXB1 793 aa6.13□□□□□ -1.43
CHD9-205ENST00000562785 ANKRD44Q8N8A2 993 aa6.13□□□□□ -1.43
CHD9-205ENST00000562785 MPP4Q96JB8 637 aa6.13□□□□□ -1.43
CHD9-205ENST00000562785 PPP1R10Q96QC0 940 aaKnown RBP6.13□□□□□ -1.43
CHD9-205ENST00000562785 SEC62Q99442 399 aaKnown RBP6.13□□□□□ -1.43
CHD9-205ENST00000562785 MEIS3Q99687 375 aa6.13□□□□□ -1.43
CHD9-205ENST00000562785 GATA5Q9BWX5 397 aaPredicted RBP6.13□□□□□ -1.43
CHD9-205ENST00000562785 CLPBQ9H078 707 aa6.13□□□□□ -1.43
CHD9-205ENST00000562785 NUAK2Q9H093 628 aa6.13□□□□□ -1.43
CHD9-205ENST00000562785 HEMK1Q9Y5R4 338 aaPredicted RBP6.13□□□□□ -1.43
CHD9-205ENST00000562785 USP16Q9Y5T5 823 aa6.13□□□□□ -1.43
CHD9-205ENST00000562785 NPIPB13A6NJU9 1138 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 NPIPB5A8MRT5 1133 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 ERVV-1B6SEH8 477 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 NPIPB4C9JG80 1138 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 UTYO14607 1347 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 KLK10O43240 276 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 C4AP0C0L4 1744 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 RFPL3SP0C7P2 107 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 NHLRC4P0CG21 123 aaPredicted RBP6.12□□□□□ -1.43
CHD9-205ENST00000562785 CYP19A1P11511 503 aaPredicted RBP6.12□□□□□ -1.43
CHD9-205ENST00000562785 TNNT1P13805 278 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 IDUAP35475 653 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 SHC2P98077 582 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 AIMP1Q12904 312 aaKnown RBP6.12□□□□□ -1.43
CHD9-205ENST00000562785 COL24A1Q17RW2 1714 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 CERKLQ49MI3 558 aaPredicted RBP6.12□□□□□ -1.43
CHD9-205ENST00000562785 WDR45BQ5MNZ6 344 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 RETSATQ6NUM9 610 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 RANBP10Q6VN20 620 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 MAP3K15Q6ZN16 1313 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 COPS6Q7L5N1 327 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 HEATR4Q86WZ0 1026 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 CHSY1Q86X52 802 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 RFX6Q8HWS3 928 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 EXD3Q8N9H8 876 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 CELF1Q92879 486 aaKnown RBP6.12□□□□□ -1.43
CHD9-205ENST00000562785 ATP2A3Q93084 1043 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 AGAP2Q99490 1192 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 TRIM2Q9C040 744 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 PRDM13Q9H4Q3 707 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 MAFFQ9ULX9 164 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 GDAQ9Y2T3 454 aa6.12□□□□□ -1.43
CHD9-205ENST00000562785 LRP5O75197 1615 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 A6NLC8 198 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 PRRT4C9JH25 899 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 TMEM232C9JQI7 657 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 SMIM22K7EJ46 135 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 PROP1O75360 226 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 SGPL1O95470 568 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 ENO1P06733 434 aaKnown RBP6.11□□□□□ -1.43
CHD9-205ENST00000562785 ALDOCP09972 364 aaKnown RBP6.11□□□□□ -1.43
CHD9-205ENST00000562785 CPA1P15085 419 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 TGM2P21980 687 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 PRPH2P23942 346 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 CRKLP46109 303 aaKnown RBP6.11□□□□□ -1.43
CHD9-205ENST00000562785 TUBP50607 506 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 MTX1Q13505 466 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 GPR162Q16538 588 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 PFKFB3Q16875 520 aaPredicted RBP6.11□□□□□ -1.43
CHD9-205ENST00000562785 FCRLBQ6BAA4 426 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 FAM98AQ8NCA5 519 aaKnown RBP6.11□□□□□ -1.43
CHD9-205ENST00000562785 CCDC191Q8NCU4 936 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 ZNF398Q8TD17 642 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 MASTLQ96GX5 879 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 UNC45AQ9H3U1 944 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 ARL8BQ9NVJ2 186 aa6.11□□□□□ -1.43
CHD9-205ENST00000562785 CWC25Q9NXE8 425 aaPredicted RBP6.11□□□□□ -1.43
CHD9-205ENST00000562785 AOX1Q06278 1338 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 RRHO14718 337 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 EPB41L2O43491 1005 aaKnown RBP6.1□□□□□ -1.43
CHD9-205ENST00000562785 EIF5BO60841 1220 aaKnown RBP6.1□□□□□ -1.43
CHD9-205ENST00000562785 FSHBP01225 129 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 HNRNPA1P09651 372 aaKnown RBP eCLIP6.1□□□□□ -1.43
CHD9-205ENST00000562785 CYP2A6P11509 494 aaPredicted RBP6.1□□□□□ -1.43
CHD9-205ENST00000562785 LYL1P12980 280 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 PSMC2P35998 433 aaKnown RBP6.1□□□□□ -1.43
CHD9-205ENST00000562785 PTH2RP49190 550 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 G3BP1Q13283 466 aaKnown RBP eCLIP6.1□□□□□ -1.43
CHD9-205ENST00000562785 GCKRQ14397 625 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 SLC4A8Q2Y0W8 1093 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 RUNDC3AQ59EK9 446 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 PRAMEF17Q5VTA0 474 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 LIPMQ5VYY2 423 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 ZNF474Q6S9Z5 364 aaPredicted RBP6.1□□□□□ -1.43
CHD9-205ENST00000562785 RTL10Q7L3V2 364 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 TFAP2DQ7Z6R9 452 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.1□□□□□ -1.43
CHD9-205ENST00000562785 ERC1Q8IUD2 1116 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 SCN4BQ8IWT1 228 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 HVCN1Q96D96 273 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 ABHD14AQ9BUJ0 271 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 USP44Q9H0E7 712 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 OSBPL5Q9H0X9 879 aaPredicted RBP6.1□□□□□ -1.43
CHD9-205ENST00000562785 IKZF4Q9H2S9 585 aa6.1□□□□□ -1.43
CHD9-205ENST00000562785 STN1Q9H668 368 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms