RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 SRRM3A6NNA2 597 aaPredicted RBP3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 IFRD1O00458 451 aaPredicted RBP3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 METTL18O95568 372 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 GLUD1P00367 558 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 DHRS4L1P0CG22 281 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 KLRC2P26717 231 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 GLUD2P49448 558 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 TAF6P49848 677 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 ZBTB16Q05516 673 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 LRRC24Q50LG9 513 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 ENTPD8Q5MY95 495 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 ASPHD1Q5U4P2 390 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 WBP2NLQ6ICG8 309 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 AADACL2Q6P093 401 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 MTFR2Q6P444 385 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 AAGABQ6PD74 315 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 DSTYKQ6XUX3 929 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 RNF144BQ7Z419 303 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 NKAPQ8N5F7 415 aaKnown RBP3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 TMEM217Q8N7C4 229 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 SPPL3Q8TCT6 385 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 C2CD4CQ8TF44 421 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 AFG1LQ8WV93 481 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 INPP5DQ92835 1189 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 RTP4Q96DX8 246 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 FRG2BQ96QU4 278 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 FRMD8Q9BZ67 464 aaPredicted RBP3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 CHODLQ9H9P2 273 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 PLAC1Q9HBJ0 212 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 ZNF304Q9HCX3 659 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 RASSF1Q9NS23 344 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 THAP1Q9NVV9 213 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 TBC1D14Q9P2M4 693 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 KLQ9UEF7 1012 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 DERAQ9Y315 318 aa3.37□□□□□ -1.87
HDGFL3-202ENST00000562702 ANTXRLA6NF34 631 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 SAC3D1A6NKF1 404 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 SPRY3O43610 288 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 FCGR1AP12314 374 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 LYL1P12980 280 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 GM2AP17900 193 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 PAPOLAP51003 745 aaKnown RBP3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 ARL4CP56559 192 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 SEC61A1P61619 476 aaKnown RBP3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 KRTAP24-1Q3LI83 254 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 CTXN3Q4LDR2 81 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 ZNF484Q5JVG2 852 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 Q5PR19 223 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 C9orf57Q5W0N0 161 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 H1FNTQ75WM6 255 aaPredicted RBP3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 C16orf82Q7Z2V1 217 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 MOGAT3Q86VF5 341 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 C2CD5Q86YS7 1000 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 CAMK1DQ8IU85 385 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 BRSK2Q8IWQ3 736 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 RBM17Q96I25 401 aaKnown RBP3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 HERPUD2Q9BSE4 406 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 ISCA1Q9BUE6 129 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 C1QTNF4Q9BXJ3 329 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 HIPK3Q9H422 1215 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 ACAD9Q9H845 621 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 MAP6D1Q9H9H5 199 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 SUFUQ9UMX1 484 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 OSGIN2Q9Y236 505 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 RRP7AQ9Y3A4 280 aaKnown RBP3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 PTGDR2Q9Y5Y4 395 aa3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 MORC2Q9Y6X9 1032 aaPredicted RBP3.36□□□□□ -1.87
HDGFL3-202ENST00000562702 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 MYO15BQ96JP2 1530 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 TRBV5-7A0A0A0MS05 114 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 LOC102724159A0A0B4J2E5 919 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 STX16-NPEPL1H3BU86 382 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 STX16O14662 325 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 STRNO43815 780 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 KIF1CO43896 1103 aaKnown RBP3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 HBP1O60381 514 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 TMCC1O94876 653 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 SP1P08047 785 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 CSF1P09603 554 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 FCGR2AP12318 317 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 PRKCHP24723 683 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 SKIV2L2P42285 1042 aaKnown RBP3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 VEGFCP49767 419 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 RASSF2P50749 326 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 CLCN5P51795 746 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 CLCNKBP51801 687 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 Q0VFX4 171 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 PWP2Q15269 919 aaKnown RBP3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 TAF5Q15542 800 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 TMEM268Q5VZI3 342 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 ADAM5Q6NVV9 412 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 FTSJ3Q8IY81 847 aaKnown RBP3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 ANKRD44Q8N8A2 993 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 ANKRD42Q8N9B4 389 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 LRRC57Q8N9N7 239 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 DBF4BQ8NFT6 615 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 CMASQ8NFW8 434 aaPredicted RBP3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 CEP70Q8NHQ1 597 aa3.35□□□□□ -1.87
HDGFL3-202ENST00000562702 HDAC7Q8WUI4 952 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms