RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 PCDH18Q9HCL0 1135 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 SYBUQ9NX95 663 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 AJAP1Q9UKB5 411 aaPredicted RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 YIPF1Q9Y548 306 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 CBX4O00257 560 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 ADAM12O43184 909 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 CLASP2O75122 1294 aaKnown RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 PEX11AO75192 247 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 COQ9O75208 318 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 TRUB2O95900 331 aaKnown RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 ATP5BP06576 529 aaKnown RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 WASP42768 502 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 ASPAP45381 313 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 POM121L1PQ3SYA9 428 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 IFNLR1Q8IU57 520 aaPredicted RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 SIX5Q8N196 739 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 ZNF786Q8N393 782 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 ZNF75CPQ92670 426 aaPredicted RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 RMND5BQ96G75 393 aaPredicted RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 OXNAD1Q96HP4 312 aaPredicted RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 ELAC1Q9H777 363 aaKnown RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 UXTQ9UBK9 157 aaPredicted RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 NDRG2Q9UN36 371 aaKnown RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 TRAV19A0A0A6YYK7 116 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 LOC100653049A0A140TA62 436 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 F5H5T6 163 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 F8W8V4 182 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 EEF2KO00418 725 aaKnown RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 KRT34O76011 436 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 BCL10O95999 233 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 NAA20P61599 178 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 MGAT3Q09327 533 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 NUDT18Q6ZVK8 323 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 FAM183BPQ6ZVS7 135 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 HORMAD1Q86X24 394 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 FAM71AQ8IYT1 594 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 CSGALNACT1Q8TDX6 532 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 LRRN4Q8WUT4 740 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 DEPDC1BQ8WUY9 529 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 TMA16Q96EY4 203 aaKnown RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 CFAP97Q9P2B7 532 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 KLHL8Q9P2G9 620 aaPredicted RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 VPS28Q9UK41 221 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 MYRFQ9Y2G1 1151 aa6.94□□□□□ -1.3
LINC02249-202ENST00000562624 GPC6Q9Y625 555 aaPredicted RBP6.94□□□□□ -1.3
LINC02249-202ENST00000562624 A0A087WXM4 84 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 GSC2O15499 205 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TBC1D4O60343 1298 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 PTPN2P17706 415 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 OTUD4Q01804 1114 aaKnown RBP6.93□□□□□ -1.3
LINC02249-202ENST00000562624 KRR1Q13601 381 aaKnown RBP6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TRIM71Q2Q1W2 868 aaKnown RBP6.93□□□□□ -1.3
LINC02249-202ENST00000562624 RAP1GAP2Q684P5 730 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 DUPD1Q68J44 220 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TMEM110Q86TL2 294 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 ZNF677Q86XU0 584 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 ANKMY2Q8IV38 441 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 LGI2Q8N0V4 545 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 SLC25A41Q8N5S1 370 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 KLF6Q99612 283 aaPredicted RBP6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TMEM109Q9BVC6 243 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TRIM62Q9BVG3 475 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TKTL2Q9H0I9 626 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 GANQ9H2C0 597 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 THG1LQ9NWX6 298 aaKnown RBP6.93□□□□□ -1.3
LINC02249-202ENST00000562624 FAM8A1Q9UBU6 413 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 CAB39Q9Y376 341 aaPredicted RBP6.93□□□□□ -1.3
LINC02249-202ENST00000562624 STYXL1Q9Y6J8 313 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 OTOFQ9HC10 1997 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.93□□□□□ -1.3
LINC02249-202ENST00000562624 C1orf232A0A0U1RR37 186 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 PIRO00625 290 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 GNGT2O14610 69 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 AIM2O14862 343 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 INPPL1O15357 1258 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TGM5O43548 720 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 KRT7P08729 469 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 CCR1P32246 355 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 CREMQ03060 361 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 ZNF177Q13360 481 aaPredicted RBP6.93□□□□□ -1.3
LINC02249-202ENST00000562624 MAPRE2Q15555 327 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 NFIL3Q16649 462 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 PDK4Q16654 411 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 CLEC16AQ2KHT3 1053 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 PTPN20Q4JDL3 420 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TCEAL5Q5H9L2 206 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TTC27Q6P3X3 843 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 RFWD3Q6PCD5 774 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TRAF7Q6Q0C0 670 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 NT5DC3Q86UY8 548 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 MCOLN2Q8IZK6 566 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 ZNF317Q96PQ6 595 aaPredicted RBP6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TMEM175Q9BSA9 504 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 CCDC90BQ9GZT6 254 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 BRD8Q9H0E9 1235 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 POPDC2Q9HBU9 364 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 TBCCD1Q9NVR7 557 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 HCFC1R1Q9NWW0 138 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 HCFC2Q9Y5Z7 792 aa6.93□□□□□ -1.3
LINC02249-202ENST00000562624 MTMR11A4FU01 709 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms