RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 DPY19L3Q6ZPD9 716 aa25.82■■□□□ 1.72
NME3-202ENST00000561637 SLC39A7Q92504 469 aa25.82■■□□□ 1.72
NME3-202ENST00000561637 NAP1L5Q96NT1 182 aaPredicted RBP25.82■■□□□ 1.72
NME3-202ENST00000561637 MCEEQ96PE7 176 aa25.82■■□□□ 1.72
NME3-202ENST00000561637 FUCA2Q9BTY2 467 aa25.82■■□□□ 1.72
NME3-202ENST00000561637 ACE2Q9BYF1 805 aaPredicted RBP25.82■■□□□ 1.72
NME3-202ENST00000561637 PPARGC1AQ9UBK2 798 aaKnown RBP25.82■■□□□ 1.72
NME3-202ENST00000561637 DNAI1Q9UI46 699 aa25.82■■□□□ 1.72
NME3-202ENST00000561637 KPNA3O00505 521 aaPredicted RBP25.81■■□□□ 1.72
NME3-202ENST00000561637 ATMINO43313 823 aaPredicted RBP25.81■■□□□ 1.72
NME3-202ENST00000561637 PLEKP08567 350 aaPredicted RBP25.81■■□□□ 1.72
NME3-202ENST00000561637 GRK6P43250 576 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 CLDN6P56747 220 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 C21orf59P57076 290 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 SHBQ15464 509 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 PPP1R15BQ5SWA1 713 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 DNAJC24Q6P3W2 148 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 GATAD2AQ86YP4 633 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 KLK6Q92876 244 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 BPIFA3Q9BQP9 254 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 OSBPL2Q9H1P3 480 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 CAAP1Q9H8G2 361 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 WASF2Q9Y6W5 498 aa25.81■■□□□ 1.72
NME3-202ENST00000561637 CHD5Q8TDI0 1954 aa25.8■■□□□ 1.72
NME3-202ENST00000561637 PTPRQQ9UMZ3 2332 aa25.8■■□□□ 1.72
NME3-202ENST00000561637 SIGLEC16A6NMB1 481 aa25.8■■□□□ 1.72
NME3-202ENST00000561637 TMCO5BA8MYB1 307 aa25.8■■□□□ 1.72
NME3-202ENST00000561637 FERP16591 822 aa25.8■■□□□ 1.72
NME3-202ENST00000561637 CD38P28907 300 aa25.8■■□□□ 1.72
NME3-202ENST00000561637 SERPINH1P50454 418 aaKnown RBP25.8■■□□□ 1.72
NME3-202ENST00000561637 CCT8P50990 548 aa25.8■■□□□ 1.72
NME3-202ENST00000561637 NRG1Q02297 640 aaPredicted RBP25.8■■□□□ 1.72
NME3-202ENST00000561637 C1QBPQ07021 282 aaKnown RBP25.8■■□□□ 1.72
NME3-202ENST00000561637 ARSIQ5FYB1 569 aa25.8■■□□□ 1.72
NME3-202ENST00000561637 MCOLN2Q8IZK6 566 aa25.8■■□□□ 1.72
NME3-202ENST00000561637 NETO2Q8NC67 525 aa25.8■■□□□ 1.72
NME3-202ENST00000561637 MYOCQ99972 504 aa25.8■■□□□ 1.72
NME3-202ENST00000561637 LRRC53A6NM62 1247 aa25.79■■□□□ 1.72
NME3-202ENST00000561637 PRLRP16471 622 aa25.79■■□□□ 1.72
NME3-202ENST00000561637 RHOQP17081 205 aa25.79■■□□□ 1.72
NME3-202ENST00000561637 DNA2P51530 1060 aa25.79■■□□□ 1.72
NME3-202ENST00000561637 IQCB1Q15051 598 aa25.79■■□□□ 1.72
NME3-202ENST00000561637 ARL13BQ3SXY8 428 aa25.79■■□□□ 1.72
NME3-202ENST00000561637 ACBD5Q5T8D3 534 aaPredicted RBP25.79■■□□□ 1.72
NME3-202ENST00000561637 ACAD10Q6JQN1 1059 aa25.79■■□□□ 1.72
NME3-202ENST00000561637 ZNF783Q6ZMS7 281 aa25.79■■□□□ 1.72
NME3-202ENST00000561637 ARHGEF2Q92974 986 aaKnown RBP25.79■■□□□ 1.72
NME3-202ENST00000561637 TBC1D31Q96DN5 1066 aa25.79■■□□□ 1.72
NME3-202ENST00000561637 TM6SF2Q9BZW4 377 aa25.79■■□□□ 1.72
NME3-202ENST00000561637 NAT10Q9H0A0 1025 aaKnown RBP25.79■■□□□ 1.72
NME3-202ENST00000561637 TMEM51Q9NW97 253 aa25.79■■□□□ 1.72
NME3-202ENST00000561637 COL5A1P20908 1838 aaPredicted RBP25.79■■□□□ 1.72
NME3-202ENST00000561637 A0A1B0GTQ1 180 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 SLC7A4O43246 635 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 PCDHGA12O60330 932 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 RNGTTO60942 597 aaKnown RBP25.78■■□□□ 1.72
NME3-202ENST00000561637 LEFTY1O75610 366 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 GKP32189 559 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 ZNF165P49910 485 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 CLCN6P51797 869 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 NAPEPLDQ6IQ20 393 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 SCYL2Q6P3W7 929 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 SPATS2Q86XZ4 545 aaKnown RBP25.78■■□□□ 1.72
NME3-202ENST00000561637 OR6K2Q8NGY2 324 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 NTAN1Q96AB6 310 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 KLC2Q9H0B6 622 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 PRORYQ9H606 182 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 NOL6Q9H6R4 1146 aaKnown RBP25.78■■□□□ 1.72
NME3-202ENST00000561637 TMEM248Q9NWD8 314 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 GPATCH2LQ9NWQ4 482 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 RAI2Q9Y5P3 530 aa25.78■■□□□ 1.72
NME3-202ENST00000561637 TLX3O43711 291 aaPredicted RBP25.77■■□□□ 1.72
NME3-202ENST00000561637 ZNF143P52747 638 aaPredicted RBP25.77■■□□□ 1.72
NME3-202ENST00000561637 NXPH1P58417 271 aa25.77■■□□□ 1.72
NME3-202ENST00000561637 RETSATQ6NUM9 610 aa25.77■■□□□ 1.72
NME3-202ENST00000561637 TRIM69Q86WT6 500 aa25.77■■□□□ 1.72
NME3-202ENST00000561637 TMIEQ8NEW7 156 aa25.77■■□□□ 1.72
NME3-202ENST00000561637 VOPP1Q96AW1 172 aa25.77■■□□□ 1.72
NME3-202ENST00000561637 ELF4Q99607 663 aaPredicted RBP25.77■■□□□ 1.72
NME3-202ENST00000561637 FZD3Q9NPG1 666 aa25.77■■□□□ 1.72
NME3-202ENST00000561637 IL36AQ9UHA7 158 aa25.77■■□□□ 1.72
NME3-202ENST00000561637 A0A1W2PQU0 124 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 TK2O00142 265 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 ATXN7O15265 892 aaPredicted RBP25.76■■□□□ 1.71
NME3-202ENST00000561637 TNFAIP3P21580 790 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 MAPKAPK2P49137 400 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 CCNHP51946 323 aaPredicted RBP25.76■■□□□ 1.71
NME3-202ENST00000561637 SEL1L3Q68CR1 1132 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 ZNF571Q7Z3V5 609 aaPredicted RBP25.76■■□□□ 1.71
NME3-202ENST00000561637 SLFN11Q7Z7L1 901 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 PRPF39Q86UA1 669 aaKnown RBP25.76■■□□□ 1.71
NME3-202ENST00000561637 TMPRSS12Q86WS5 348 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 CCDC114Q96M63 670 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 TRIM7Q9C029 511 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 KDM4CQ9H3R0 1056 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 FTSJ1Q9UET6 329 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 FARP1Q9Y4F1 1045 aaPredicted RBP25.76■■□□□ 1.71
NME3-202ENST00000561637 TENM4Q6N022 2769 aa25.76■■□□□ 1.71
NME3-202ENST00000561637 CFAP46Q8IYW2 2715 aa25.75■■□□□ 1.71
NME3-202ENST00000561637 A0A1B0GTH6 734 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms