RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 TBC1D3Q8IZP1 549 aaPredicted RBP15.77■□□□□ 0.12
CCDC113-203ENST00000561517 RNF214Q8ND24 703 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 KCTD15Q96SI1 283 aaPredicted RBP15.77■□□□□ 0.12
CCDC113-203ENST00000561517 DNAJC7Q99615 494 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 HEPHQ9BQS7 1158 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 DONSONQ9NYP3 566 aa15.77■□□□□ 0.12
CCDC113-203ENST00000561517 ACACBO00763 2458 aa15.77■□□□□ 0.11
CCDC113-203ENST00000561517 ANKRD36A6QL64 1941 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 RASA4BC9J798 803 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 EEF2KO00418 725 aaKnown RBP15.76■□□□□ 0.11
CCDC113-203ENST00000561517 GIPC1O14908 333 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 RASA4O43374 803 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 LEFTY1O75610 366 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 CER1O95813 267 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 GSRP00390 522 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 ZNF883P0CG24 379 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 NUDT1P36639 197 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 EIF4A3P38919 411 aaKnown RBP15.76■□□□□ 0.11
CCDC113-203ENST00000561517 HCAR3P49019 387 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 CCNHP51946 323 aaPredicted RBP15.76■□□□□ 0.11
CCDC113-203ENST00000561517 ZNF135P52742 658 aaPredicted RBP15.76■□□□□ 0.11
CCDC113-203ENST00000561517 CCDC15Q0P6D6 951 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 SERINC3Q13530 473 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 PIGHQ14442 188 aaPredicted RBP15.76■□□□□ 0.11
CCDC113-203ENST00000561517 KIF19Q2TAC6 998 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 HLA-BQ31612 363 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 ARSIQ5FYB1 569 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 CCDC122Q5T0U0 273 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 N4BP2L1Q5TBK1 243 aaPredicted RBP15.76■□□□□ 0.11
CCDC113-203ENST00000561517 NIPA2Q8N8Q9 360 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 OR8K1Q8NGG5 319 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 GRIN3AQ8TCU5 1115 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 CASKIN2Q8WXE0 1202 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 HMCESQ96FZ2 354 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 HDAC8Q9BY41 377 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 KLC2Q9H0B6 622 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 GAREM1Q9H706 876 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 LRRC19Q9H756 370 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 PREBQ9HCU5 417 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 ANKRD6Q9Y2G4 727 aa15.76■□□□□ 0.11
CCDC113-203ENST00000561517 SHROOM3Q8TF72 1996 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 VILLO15195 856 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 BUB1O43683 1085 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 KCNA4P22459 653 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 ITGB7P26010 798 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 IL1R2P27930 398 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 DNA2P51530 1060 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 NDST2P52849 883 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 MAPK8IP2Q13387 824 aaPredicted RBP15.75■□□□□ 0.11
CCDC113-203ENST00000561517 ASTE1Q2TB18 679 aaPredicted RBP15.75■□□□□ 0.11
CCDC113-203ENST00000561517 INO80DQ53TQ3 878 aaPredicted RBP15.75■□□□□ 0.11
CCDC113-203ENST00000561517 NEK5Q6P3R8 708 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 LAYNQ6UX15 382 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 RFX8Q6ZV50 586 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 ERN2Q76MJ5 926 aaKnown RBP15.75■□□□□ 0.11
CCDC113-203ENST00000561517 DEFB124Q8NES8 71 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 OR2AP1Q8NGE2 309 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 VOPP1Q96AW1 172 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 ARHGEF26Q96DR7 871 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 PPP1R16AQ96I34 528 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 LRIG1Q96JA1 1093 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 SLC6A18Q96N87 628 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 NUP85Q9BW27 656 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 TM6SF2Q9BZW4 377 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 SLC32A1Q9H598 525 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 IL21RQ9HBE5 538 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 DYRK4Q9NR20 520 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 HECAQ9UBI9 543 aaPredicted RBP15.75■□□□□ 0.11
CCDC113-203ENST00000561517 SNX11Q9Y5W9 270 aa15.75■□□□□ 0.11
CCDC113-203ENST00000561517 TDRD6O60522 2096 aaKnown RBP15.75■□□□□ 0.11
CCDC113-203ENST00000561517 SSU72P8A0A1W2PR75 194 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 A0A1W2PR77 199 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 WNT9AO14904 365 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 TMCC1O94876 653 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 WNT1P04628 370 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 ERCC2P18074 760 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 CTSKP43235 329 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 SNRPD1P62314 119 aaKnown RBP15.74■□□□□ 0.11
CCDC113-203ENST00000561517 DPYSL2Q16555 572 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 SLC18A3Q16572 532 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 BOLA3Q53S33 107 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 KCNT1Q5JUK3 1230 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 AFMIDQ63HM1 303 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 LEKR1Q6ZMV7 388 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 PRPF39Q86UA1 669 aaKnown RBP15.74■□□□□ 0.11
CCDC113-203ENST00000561517 ZNF354CQ86Y25 554 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 SERAC1Q96JX3 654 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 CWC15Q9P013 229 aaKnown RBP15.74■□□□□ 0.11
CCDC113-203ENST00000561517 IP6K2Q9UHH9 426 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 ANAPC7Q9UJX3 599 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 DMTF1Q9Y222 760 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 FNDC3AQ9Y2H6 1198 aaKnown RBP15.74■□□□□ 0.11
CCDC113-203ENST00000561517 CHD8Q9HCK8 2581 aa15.74■□□□□ 0.11
CCDC113-203ENST00000561517 POP4O95707 220 aaKnown RBP15.73■□□□□ 0.11
CCDC113-203ENST00000561517 TCF4P15884 667 aa15.73■□□□□ 0.11
CCDC113-203ENST00000561517 CD38P28907 300 aa15.73■□□□□ 0.11
CCDC113-203ENST00000561517 PMLP29590 882 aa15.73■□□□□ 0.11
CCDC113-203ENST00000561517 NEK3P51956 506 aa15.73■□□□□ 0.11
CCDC113-203ENST00000561517 HNRNPDQ14103 355 aaKnown RBP15.73■□□□□ 0.11
CCDC113-203ENST00000561517 DPYSQ14117 519 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 983.4 ms