RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	TSSK4	Q6SA08	328 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	ARHGAP36	Q6ZRI8	547 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	GAREM2	Q75VX8	874 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	RTL10	Q7L3V2	364 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	TFAP2D	Q7Z6R9	452 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	CAND1	Q86VP6	1230 aa	Known RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	CIR1	Q86X95	450 aa	Predicted RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	LRRC49	Q8IUZ0	686 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	ZBED8	Q8IZ13	594 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	PDIK1L	Q8N165	341 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	ELMOD1	Q8N336	334 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	UHMK1	Q8TAS1	419 aa	Known RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	NELL1	Q92832	810 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	FATE1	Q969F0	183 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	MYEOV	Q96EZ4	313 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	C9orf72	Q96LT7	481 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	RPRD1A	Q96P16	312 aa	Predicted RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	SERPINB12	Q96P63	405 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	GCNA	Q96QF7	691 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	VAT1	Q99536	393 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	GORASP1	Q9BQQ3	440 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	CEP41	Q9BYV8	373 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	SLC39A8	Q9C0K1	460 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	GBA3	Q9H227	469 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	RETREG1	Q9H6L5	497 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	TMBIM4	Q9HC24	238 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	LRRC4C	Q9HCJ2	640 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	TRPC7	Q9HCX4	862 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	MAN1C1	Q9NR34	630 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	KLHL8	Q9P2G9	620 aa	Predicted RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	TRHDE	Q9UKU6	1024 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	RAB23	Q9ULC3	237 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	ZMIZ1	Q9ULJ6	1067 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	ADAMTS20	P59510	1910 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	MYO18A	Q92614	2054 aa	Known RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	WDFY3	Q8IZQ1	3526 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	SDK1	Q7Z5N4	2213 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	AKAP13	Q12802	2813 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395		A0A087WUV0	522 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	CCDC195	A0A1B0GUA6	201 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	GOLGA6C	A6NDK9	693 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	ARHGAP42	A6NI28	874 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	SOBP	A7XYQ1	873 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	HMGB1P1	B2RPK0	211 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	RASA4B	C9J798	803 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395		E7EVH7	732 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395		F5H423	210 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	NRG2	O14511	850 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	MATN3	O15232	486 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	POLR3G	O15318	223 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	RASA4	O43374	803 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	GREM1	O60565	184 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	TCEA3	O75764	348 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	JCHAIN	P01591	159 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	KLKB1	P03952	638 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	GOLGA6D	P0CG33	693 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	IRF1	P10914	325 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	MBL2	P11226	248 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	TSHR	P16473	764 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	PFKL	P17858	780 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	GABRR2	P28476	465 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	HOXA9	P31269	272 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	SLC6A4	P31645	630 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	CD68	P34810	354 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	MAGEA9	P43362	315 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	MAPKAPK2	P49137	400 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	PAPOLA	P51003	745 aa	Known RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	EPHA5	P54756	1037 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	CBX1	P83916	185 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	CYP4F8	P98187	520 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	MLF2	Q15773	248 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	PARP6	Q2NL67	630 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	BBS9	Q3SYG4	887 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	PARP15	Q460N3	678 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	CCDC38	Q502W7	563 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	TEX44	Q53QW1	395 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	RABGAP1L	Q5R372	815 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	PPM1L	Q5SGD2	360 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	SYCP2L	Q5T4T6	812 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	AGBL2	Q5U5Z8	902 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	TXNDC8	Q6A555	127 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	LAIR1	Q6GTX8	287 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	TIGD7	Q6NT04	549 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	RFWD3	Q6PCD5	774 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	PRR23C	Q6ZRP0	262 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	ZNF534	Q76KX8	674 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	GET4	Q7L5D6	327 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	CROCCP2	Q86T23	111 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	ANKMY2	Q8IV38	441 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	DENND1C	Q8IV53	801 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	KLHDC8B	Q8IXV7	354 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	LGI2	Q8N0V4	545 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	ATP11C	Q8NB49	1132 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	FBXO36	Q8NEA4	188 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	ST13P5	Q8NFI4	369 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	EPS8L3	Q8TE67	593 aa	Known RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	MAML1	Q92585	1016 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	MRPS31	Q92665	395 aa	Known RBP	7.66	□□□□□ -1.18

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