RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 NSUN2Q08J23 767 aaKnown RBP eCLIP10.45□□□□□ -0.74
LRRC28-221ENST00000561276 STARD3Q14849 445 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 CARD16Q5EG05 197 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 FAM182AQ5T1J6 154 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 C22orf39Q6P5X5 142 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 DARS2Q6PI48 645 aaKnown RBP10.45□□□□□ -0.74
LRRC28-221ENST00000561276 ZSCAN30Q86W11 494 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 C1orf210Q8IVY1 113 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 PLPP6Q8IY26 295 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 STK40Q8N2I9 435 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 CAMKK1Q8N5S9 505 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 PCDH20Q8N6Y1 951 aaKnown RBP10.45□□□□□ -0.74
LRRC28-221ENST00000561276 TSEN2Q8NCE0 465 aaKnown RBP10.45□□□□□ -0.74
LRRC28-221ENST00000561276 OR2A12Q8NGT7 310 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 MAIP1Q8WWC4 291 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 C1orf54Q8WWF1 131 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 FATE1Q969F0 183 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 FAM129BQ96TA1 746 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 LRFN3Q9BTN0 628 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 TM6SF2Q9BZW4 377 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 CEP44Q9C0F1 390 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 C10orf88Q9H8K7 445 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 CD248Q9HCU0 757 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 RBM22Q9NW64 420 aaKnown RBP eCLIP10.45□□□□□ -0.74
LRRC28-221ENST00000561276 HECAQ9UBI9 543 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-221ENST00000561276 TTC7AQ9ULT0 858 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-221ENST00000561276 R3HDM2Q9Y2K5 976 aaKnown RBP10.45□□□□□ -0.74
LRRC28-221ENST00000561276 F5P12259 2224 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 EML5Q05BV3 1969 aa10.45□□□□□ -0.74
LRRC28-221ENST00000561276 ZBTB24O43167 697 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-221ENST00000561276 LAMTOR5O43504 91 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 NEBLO76041 1014 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 POP4O95707 220 aaKnown RBP10.44□□□□□ -0.74
LRRC28-221ENST00000561276 JCHAINP01591 159 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 TUBB4AP04350 444 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 RBL1P28749 1068 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 MMP13P45452 471 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 RECQLP46063 649 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-221ENST00000561276 COPAP53621 1224 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 SNX1Q13596 522 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 ZNF235Q14590 738 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 PRKD1Q15139 912 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-221ENST00000561276 SIX1Q15475 284 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-221ENST00000561276 CCNG2Q16589 344 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 MYLK3Q32MK0 819 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 SLC45A4Q5BKX6 768 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 ATXN7L2Q5T6C5 722 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-221ENST00000561276 TMCO4Q5TGY1 634 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 DPY19L3Q6ZPD9 716 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 TMPRSS6Q8IU80 811 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 BBS5Q8N3I7 341 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 PGBD5Q8N414 524 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 RYBPQ8N488 228 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-221ENST00000561276 TEX26Q8N6G2 289 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 OR2AP1Q8NGE2 309 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 SLC35B2Q8TB61 432 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 ACTRT1Q8TDG2 376 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 HTR3CQ8WXA8 447 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 MAML1Q92585 1016 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 EXOC2Q96KP1 924 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 CCDC114Q96M63 670 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 PSKH2Q96QS6 385 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 IL12RB2Q99665 862 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 CINPQ9BW66 212 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-221ENST00000561276 MKRN2Q9H000 416 aaKnown RBP10.44□□□□□ -0.74
LRRC28-221ENST00000561276 NT5MQ9NPB1 228 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 SEPT10Q9P0V9 454 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 LHX3Q9UBR4 397 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 SEPT3Q9UH03 358 aa10.44□□□□□ -0.74
LRRC28-221ENST00000561276 TCRBV21S2A2A0A5A6 115 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 TTC24A2A3L6 582 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-221ENST00000561276 BCLAF3A2AJT9 711 aaKnown RBP10.43□□□□□ -0.74
LRRC28-221ENST00000561276 K7ESF4 209 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 PGRMC1O00264 195 aaKnown RBP10.43□□□□□ -0.74
LRRC28-221ENST00000561276 KRIT1O00522 736 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 MUSKO15146 869 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 MTSS1O43312 755 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 LIASO43766 372 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 ALDH1A2O94788 518 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 IGSF6O95976 241 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 GSRP00390 522 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 GABRG2P18507 467 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 CHRNA3P32297 505 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 RGRP47804 291 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 CSNK1DP48730 415 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 PXNP49023 591 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-221ENST00000561276 SCNN1BP51168 640 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 CCNHP51946 323 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-221ENST00000561276 MAXP61244 160 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 IFI35P80217 286 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-221ENST00000561276 RAD51Q06609 339 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 ITKQ08881 620 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 BYSLQ13895 437 aaKnown RBP10.43□□□□□ -0.74
LRRC28-221ENST00000561276 ELAVL3Q14576 367 aaKnown RBP10.43□□□□□ -0.74
LRRC28-221ENST00000561276 TEX44Q53QW1 395 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 ARSIQ5FYB1 569 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 HEATR6Q6AI08 1181 aaKnown RBP10.43□□□□□ -0.74
LRRC28-221ENST00000561276 TSSK4Q6SA08 328 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 SRLQ86TD4 932 aa10.43□□□□□ -0.74
LRRC28-221ENST00000561276 CREG2Q8IUH2 290 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms