RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TFEBP19484 476 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ICAM3P32942 547 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 THPOP40225 353 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 RPIAP49247 311 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 BCAP31P51572 246 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 AFF1P51825 1210 aaKnown RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 CHN2P52757 468 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 RPL26P61254 145 aaKnown RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 LRRC74AQ0VAA2 488 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ASPHQ12797 758 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 NOGQ13253 232 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ARHGEF18Q6ZSZ5 1173 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 LYSMD2Q8IV50 215 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 CCDC117Q8IWD4 279 aaPredicted RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TMCO5AQ8N6Q1 288 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ATP2A3Q93084 1043 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 NEURL2Q9BR09 285 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TRIM51Q9BSJ1 452 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ACE2Q9BYF1 805 aaPredicted RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TRIM31Q9BZY9 425 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 MLXIPLQ9NP71 852 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 NIP7Q9Y221 180 aaKnown RBP eCLIP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 BTAF1O14981 1849 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 THSD7AQ9UPZ6 1657 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 CCDC160A6NGH7 325 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 BTNL10A8MVZ5 291 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TNFRSF10AO00220 468 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 DNPH1O43598 174 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 GAS8O95995 478 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 GH1P01241 217 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TFAP2AP05549 437 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 PCSK6P29122 969 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 SLC5A2P31639 672 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 MTIF2P46199 727 aaKnown RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TUBA4AP68366 448 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 NDUFA5Q16718 116 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 KIZQ2M2Z5 673 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 KHDC1LQ5JSQ8 128 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 DHRS4L2Q6PKH6 230 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ZDHHC24Q6UX98 284 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ARHGAP27Q6ZUM4 889 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 OTOP1Q7RTM1 612 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 HEATR3Q7Z4Q2 680 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 PDSS2Q86YH6 399 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 UNC45BQ8IWX7 931 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 WDTC1Q8N5D0 677 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 CSGALNACT2Q8N6G5 542 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ZFP28Q8NHY6 868 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ANKRD49Q8WVL7 239 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 AUTS2Q8WXX7 1259 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 HSPH1Q92598 858 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 CCDC127Q96BQ5 260 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 KCTD12Q96CX2 325 aaKnown RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TWNKQ96RR1 684 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 SLC39A3Q9BRY0 314 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ERP44Q9BS26 406 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 MYL10Q9BUA6 226 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TUBB6Q9BUF5 446 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 PACSIN1Q9BY11 444 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 SLC7A5P2Q9GIP4 190 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 KCNK9Q9NPC2 374 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 NDE1Q9NXR1 346 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 THEGQ9P2T0 379 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 UVRAGQ9P2Y5 699 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ZFP69BQ9UJL9 534 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TRAF3IP3Q9Y228 551 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 SSX2IPQ9Y2D8 614 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 CNTNAP4Q9C0A0 1308 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 EIF2S1P05198 315 aaKnown RBP6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 UQCRBP14927 111 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 CREB1P16220 341 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 FPR2P25090 351 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 FOXN2P32314 431 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 LTBRP36941 435 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 CTSKP43235 329 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 HAND2P61296 217 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 THOC5Q13769 683 aaKnown RBP6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 E2F2Q14209 437 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 NR0B2Q15466 257 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 METTL13Q8N6R0 699 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 FANCBQ8NB91 859 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 DDHD1Q8NEL9 900 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 OR6Y1Q8NGX8 325 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 MCUR1Q96AQ8 359 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 SNX22Q96L94 193 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 CNOT6LQ96LI5 555 aaKnown RBP6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 C1orf74Q96LT6 269 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 SERPINB12Q96P63 405 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 PKP4Q99569 1192 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 FAM207AQ9NSI2 230 aaPredicted RBP6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 KCNJ14Q9UNX9 436 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 SNX9Q9Y5X1 595 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 FAM187AA6NFU0 413 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 TTC34A8MYJ7 566 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 UBE2Q2LH0YL09 131 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 GYG2O15488 501 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 PSMD10O75832 226 aa6.86□□□□□ -1.31
TSPAN3-209ENST00000560715 BMP15O95972 392 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms