RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CWC15Q9P013 229 aaKnown RBP13.46□□□□□ -0.25
SMAD3-213ENST00000560175 IL36AQ9UHA7 158 aa13.46□□□□□ -0.25
SMAD3-213ENST00000560175 IP6K2Q9UHH9 426 aa13.46□□□□□ -0.25
SMAD3-213ENST00000560175 HPCAL4Q9UM19 191 aa13.46□□□□□ -0.25
SMAD3-213ENST00000560175 FCF1Q9Y324 198 aaKnown RBP13.46□□□□□ -0.25
SMAD3-213ENST00000560175 MFHAS1Q9Y4C4 1052 aa13.46□□□□□ -0.25
SMAD3-213ENST00000560175 EEF2KO00418 725 aaKnown RBP13.45□□□□□ -0.26
SMAD3-213ENST00000560175 MFAP3LO75121 409 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 LEFTY1O75610 366 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 FSBPO95073 299 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 KCNK5O95279 499 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 CEACAM1P13688 526 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 CD59P13987 128 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 TCF4P15884 667 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 ERCC2P18074 760 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 TPI1P60174 286 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 SLC25A11Q02978 314 aaKnown RBP13.45□□□□□ -0.26
SMAD3-213ENST00000560175 CCDC15Q0P6D6 951 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 DPYSQ14117 519 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 PPM1JQ5JR12 505 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 IL27RAQ6UWB1 636 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 RFX8Q6ZV50 586 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 POLNQ7Z5Q5 900 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 ARHGAP12Q8IWW6 846 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 OR2AP1Q8NGE2 309 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 TSC1Q92574 1164 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 HMCESQ96FZ2 354 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 CHP1Q99653 195 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 NUP85Q9BW27 656 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 MIR1-1HGQ9H1L0 117 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 TNKS2Q9H2K2 1166 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 PREBQ9HCU5 417 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 UVRAGQ9P2Y5 699 aa13.45□□□□□ -0.26
SMAD3-213ENST00000560175 A0A1W2PR77 199 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 MYO1FO00160 1098 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 PLK4O00444 970 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 VILLO15195 856 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 AP1G1O43747 822 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 OPHN1O60890 802 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 POP4O95707 220 aaKnown RBP13.44□□□□□ -0.26
SMAD3-213ENST00000560175 ADRB1P08588 477 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 H2AFZP0C0S5 128 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 RARAP10276 462 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 ITGB7P26010 798 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 RECQLP46063 649 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-213ENST00000560175 CSNK1EP49674 416 aaKnown RBP13.44□□□□□ -0.26
SMAD3-213ENST00000560175 ARSEP51690 589 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 CCNHP51946 323 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-213ENST00000560175 SNRPD1P62314 119 aaKnown RBP13.44□□□□□ -0.26
SMAD3-213ENST00000560175 TCEAL1Q15170 157 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 CYTH1Q15438 398 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 MYLK3Q32MK0 819 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 TXNRD3NBQ6F5E7 133 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 H2AFVQ71UI9 128 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 ERN2Q76MJ5 926 aaKnown RBP13.44□□□□□ -0.26
SMAD3-213ENST00000560175 LZTR1Q8N653 840 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 SLC39A8Q9C0K1 460 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 HECAQ9UBI9 543 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-213ENST00000560175 ANAPC7Q9UJX3 599 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 DMTF1Q9Y222 760 aa13.44□□□□□ -0.26
SMAD3-213ENST00000560175 TBC1D3DA0A087WVF3 549 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 TBC1D3IA0A087WXS9 549 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 TBC1D3EA0A087X179 549 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 TBC1D3KA0A087X1G2 549 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 TBC1D3FA6NER0 549 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-213ENST00000560175 FAM47DPA6NHR8 397 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 TBC1D3LB9A6J9 549 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 KPNA3O00505 521 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-213ENST00000560175 WNT9AO14904 365 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 BUB1O43683 1085 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 BNIP3LO60238 219 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 PRAMEF11O60813 436 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 TMCC1O94876 653 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 WNT1P04628 370 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 TBC1D3HP0C7X1 549 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 IL4RP24394 825 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 CTSKP43235 329 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 MAPK8P45983 427 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 ATXN3P54252 364 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-213ENST00000560175 ADKP55263 362 aaKnown RBP13.43□□□□□ -0.26
SMAD3-213ENST00000560175 PPP2CBP62714 309 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 PPP2CAP67775 309 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 TEAD4Q15561 434 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 ZNF423Q2M1K9 1284 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 KIF19Q2TAC6 998 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 KCNT1Q5JUK3 1230 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 TBC1D3GQ6DHY5 549 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 TBC1D3CQ6IPX1 549 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 CNGA4Q8IV77 575 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 TBC1D3Q8IZP1 549 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-213ENST00000560175 OR2I1PQ8NGU4 316 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 ZNF564Q8TBZ8 553 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-213ENST00000560175 BTBD6Q96KE9 485 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 PACSIN1Q9BY11 444 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 CPEB1Q9BZB8 566 aaKnown RBP13.43□□□□□ -0.26
SMAD3-213ENST00000560175 NHEJ1Q9H9Q4 299 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-213ENST00000560175 ZNHIT6Q9NWK9 470 aaKnown RBP13.43□□□□□ -0.26
SMAD3-213ENST00000560175 LCMT1Q9UIC8 334 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 ANKRD6Q9Y2G4 727 aa13.43□□□□□ -0.26
SMAD3-213ENST00000560175 PCDHGB2Q9Y5G2 931 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms