RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 KRT9P35527 623 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 SERPINF1P36955 418 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 PCYT1AP49585 367 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 SELENOVP59797 346 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 Q0VFX4 171 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 RPS6KA2Q15349 733 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 DUSP6Q16828 381 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 FSCBQ5H9T9 825 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 FNBP1LQ5T0N5 605 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 FAM171A1Q5VUB5 890 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 GGT6Q6P531 493 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 TMEM217Q8N7C4 229 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 ATG16L2Q8NAA4 619 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 CMASQ8NFW8 434 aaPredicted RBP4.02□□□□□ -1.77
SPG11-218ENST00000559754 SLC2A12Q8TD20 617 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 CDT1Q9H211 546 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 HIPK3Q9H422 1215 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 UBN1Q9NPG3 1134 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 OBP2BQ9NPH6 170 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 C19orf53Q9UNZ5 99 aaPredicted RBP4.02□□□□□ -1.77
SPG11-218ENST00000559754 A0A1B0GVT2 93 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 B4E171 279 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 STMND1H3BQB6 276 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 ACKR2O00590 384 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 HNRNPRO43390 633 aaKnown RBP4.01□□□□□ -1.77
SPG11-218ENST00000559754 CCNT1O60563 726 aaKnown RBP4.01□□□□□ -1.77
SPG11-218ENST00000559754 ACTL6BO94805 426 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 PAPSS2O95340 614 aaPredicted RBP4.01□□□□□ -1.77
SPG11-218ENST00000559754 TNFRSF6BO95407 300 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 GLUD1P00367 558 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 TSPAN7P41732 249 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 GLUD2P49448 558 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 DSCR9P59020 149 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 AP2B1P63010 937 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 ZBTB16Q05516 673 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 ALKBH1Q13686 389 aaKnown RBP4.01□□□□□ -1.77
SPG11-218ENST00000559754 EFR3AQ14156 821 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 FBXO47Q5MNV8 452 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 WDR45BQ5MNZ6 344 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 KLHL17Q6TDP4 642 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 DSTYKQ6XUX3 929 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 SLC44A2Q8IWA5 706 aaPredicted RBP4.01□□□□□ -1.77
SPG11-218ENST00000559754 CCDC117Q8IWD4 279 aaPredicted RBP4.01□□□□□ -1.77
SPG11-218ENST00000559754 LRRC57Q8N9N7 239 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 PCYOX1LQ8NBM8 494 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 FRG2BQ96QU4 278 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 FRMD8Q9BZ67 464 aaPredicted RBP4.01□□□□□ -1.77
SPG11-218ENST00000559754 TRIM31Q9BZY9 425 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 C6orf106Q9H6K1 298 aaPredicted RBP4.01□□□□□ -1.77
SPG11-218ENST00000559754 ELAC1Q9H777 363 aaKnown RBP4.01□□□□□ -1.77
SPG11-218ENST00000559754 ZDHHC7Q9NXF8 308 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 NDUFAF4Q9P032 175 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 LRFN1Q9P244 771 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 IFT80Q9P2H3 777 aaPredicted RBP4.01□□□□□ -1.77
SPG11-218ENST00000559754 NOL7Q9UMY1 257 aaKnown RBP4.01□□□□□ -1.77
SPG11-218ENST00000559754 RAP2CQ9Y3L5 183 aa4.01□□□□□ -1.77
SPG11-218ENST00000559754 TCRBV7S3A2A0A539 114 aa4□□□□□ -1.77
SPG11-218ENST00000559754 ANKRD18BA2A2Z9 1011 aa4□□□□□ -1.77
SPG11-218ENST00000559754 F5H0A9 414 aaPredicted RBP4□□□□□ -1.77
SPG11-218ENST00000559754 GRM8O00222 908 aa4□□□□□ -1.77
SPG11-218ENST00000559754 HOXC11O43248 304 aaPredicted RBP4□□□□□ -1.77
SPG11-218ENST00000559754 KRT86O43790 486 aa4□□□□□ -1.77
SPG11-218ENST00000559754 KIF1CO43896 1103 aaKnown RBP4□□□□□ -1.77
SPG11-218ENST00000559754 TMCC1O94876 653 aa4□□□□□ -1.77
SPG11-218ENST00000559754 HEXIM1O94992 359 aaKnown RBP4□□□□□ -1.77
SPG11-218ENST00000559754 VDRP11473 427 aa4□□□□□ -1.77
SPG11-218ENST00000559754 XBP1P17861 261 aa4□□□□□ -1.77
SPG11-218ENST00000559754 RRM1P23921 792 aa4□□□□□ -1.77
SPG11-218ENST00000559754 PRPH2P23942 346 aa4□□□□□ -1.77
SPG11-218ENST00000559754 PRKCHP24723 683 aa4□□□□□ -1.77
SPG11-218ENST00000559754 MT3P25713 68 aa4□□□□□ -1.77
SPG11-218ENST00000559754 AVPR1AP37288 418 aa4□□□□□ -1.77
SPG11-218ENST00000559754 CDK18Q07002 472 aa4□□□□□ -1.77
SPG11-218ENST00000559754 KRT81Q14533 505 aa4□□□□□ -1.77
SPG11-218ENST00000559754 SHBQ15464 509 aa4□□□□□ -1.77
SPG11-218ENST00000559754 TAF5Q15542 800 aa4□□□□□ -1.77
SPG11-218ENST00000559754 TANGO2Q6ICL3 276 aa4□□□□□ -1.77
SPG11-218ENST00000559754 HEPHL1Q6MZM0 1159 aa4□□□□□ -1.77
SPG11-218ENST00000559754 FASTKD5Q7L8L6 764 aaKnown RBP4□□□□□ -1.77
SPG11-218ENST00000559754 ANKRD23Q86SG2 305 aa4□□□□□ -1.77
SPG11-218ENST00000559754 RBM23Q86U06 439 aaKnown RBP4□□□□□ -1.77
SPG11-218ENST00000559754 TMTC1Q8IUR5 882 aa4□□□□□ -1.77
SPG11-218ENST00000559754 OR8H2Q8N162 312 aa4□□□□□ -1.77
SPG11-218ENST00000559754 ESX1Q8N693 406 aa4□□□□□ -1.77
SPG11-218ENST00000559754 TTC14Q96N46 770 aa4□□□□□ -1.77
SPG11-218ENST00000559754 FAM167BQ9BTA0 163 aa4□□□□□ -1.77
SPG11-218ENST00000559754 IFT27Q9BW83 186 aa4□□□□□ -1.77
SPG11-218ENST00000559754 HDHD5Q9BXW7 423 aa4□□□□□ -1.77
SPG11-218ENST00000559754 POLDIP3Q9BY77 421 aaKnown RBP4□□□□□ -1.77
SPG11-218ENST00000559754 XRN2Q9H0D6 950 aaKnown RBP eCLIP4□□□□□ -1.77
SPG11-218ENST00000559754 KLHL31Q9H511 634 aa4□□□□□ -1.77
SPG11-218ENST00000559754 JMJD4Q9H9V9 463 aa4□□□□□ -1.77
SPG11-218ENST00000559754 Q9N2J8 555 aa4□□□□□ -1.77
SPG11-218ENST00000559754 RIC8AQ9NPQ8 531 aa4□□□□□ -1.77
SPG11-218ENST00000559754 TMEM248Q9NWD8 314 aa4□□□□□ -1.77
SPG11-218ENST00000559754 IL36RNQ9UBH0 155 aa4□□□□□ -1.77
SPG11-218ENST00000559754 DAPP1Q9UN19 280 aa4□□□□□ -1.77
SPG11-218ENST00000559754 CLEC18AA5D8T8 446 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 A6NLC8 198 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 RNMTO43148 476 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms