RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SH2D3CQ8N5H7 860 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 ATP11CQ8NB49 1132 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 CYB5D2Q8WUJ1 264 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 MRGPRX3Q96LB0 322 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 FCRL5Q96RD9 977 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 P2RY13Q9BPV8 354 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 MGME1Q9BQP7 344 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 GORASP1Q9BQQ3 440 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 FBRSL1Q9HCM7 1045 aaKnown RBP18.37■□□□□ 0.53
CLPX-203ENST00000558958 FAM114A2Q9NRY5 505 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 HAUS2Q9NVX0 235 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 WHRNQ9P202 907 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 TPX2Q9ULW0 747 aaKnown RBP18.37■□□□□ 0.53
CLPX-203ENST00000558958 FCF1Q9Y324 198 aaKnown RBP18.37■□□□□ 0.53
CLPX-203ENST00000558958 MYO18AQ92614 2054 aaKnown RBP18.36■□□□□ 0.53
CLPX-203ENST00000558958 F5H423 210 aaPredicted RBP18.36■□□□□ 0.53
CLPX-203ENST00000558958 TP73O15350 636 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 APODP05090 189 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 SRPRAP08240 638 aaKnown RBP18.36■□□□□ 0.53
CLPX-203ENST00000558958 GLULP15104 373 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 HSPA9P38646 679 aaKnown RBP18.36■□□□□ 0.53
CLPX-203ENST00000558958 MAXP61244 160 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 BASP1P80723 227 aaKnown RBP18.36■□□□□ 0.53
CLPX-203ENST00000558958 SEMA5AQ13591 1074 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 PTPRNQ16849 979 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 RNASEH2BQ5TBB1 312 aaKnown RBP18.36■□□□□ 0.53
CLPX-203ENST00000558958 IZUMO3Q5VZ72 239 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 ATXN2LQ8WWM7 1075 aaKnown RBP18.36■□□□□ 0.53
CLPX-203ENST00000558958 CPT1BQ92523 772 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 ISG20Q96AZ6 181 aaKnown RBP18.36■□□□□ 0.53
CLPX-203ENST00000558958 POLR1EQ9GZS1 481 aaKnown RBP18.36■□□□□ 0.53
CLPX-203ENST00000558958 SLC25A51Q9H1U9 297 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 LHX3Q9UBR4 397 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 SLCO3A1Q9UIG8 710 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 DUSP12Q9UNI6 340 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 FARP1Q9Y4F1 1045 aaPredicted RBP18.36■□□□□ 0.53
CLPX-203ENST00000558958 MIA3Q5JRA6 1907 aa18.36■□□□□ 0.53
CLPX-203ENST00000558958 ZNF821O75541 412 aaPredicted RBP18.35■□□□□ 0.53
CLPX-203ENST00000558958 MAGEA6P43360 314 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 RGRP47804 291 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 TERF1P54274 439 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 ITKQ08881 620 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 NSUN2Q08J23 767 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLPX-203ENST00000558958 NIPAL4Q0D2K0 466 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 CALCOCO2Q13137 446 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 CUL1Q13616 776 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 KCNJ11Q14654 390 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 IER5LQ5T953 404 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 NUDT18Q6ZVK8 323 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 PCGF5Q86SE9 256 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 KLHDC8BQ8IXV7 354 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 BBOF1Q8ND07 529 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 ARRDC2Q8TBH0 407 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 IMP4Q96G21 291 aaKnown RBP18.35■□□□□ 0.53
CLPX-203ENST00000558958 MYO19Q96H55 970 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 PARD6BQ9BYG5 372 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 CEP44Q9C0F1 390 aa18.35■□□□□ 0.53
CLPX-203ENST00000558958 ATP9BO43861 1147 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 BMP1P13497 986 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 CR2P20023 1033 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 CARSP49589 748 aaKnown RBP18.34■□□□□ 0.53
CLPX-203ENST00000558958 ITGA8P53708 1063 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 RHOAP61586 193 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 DSC2Q02487 901 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 DGKKQ5KSL6 1271 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 HIBCHQ6NVY1 386 aaPredicted RBP18.34■□□□□ 0.53
CLPX-203ENST00000558958 WDR93Q6P2C0 686 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 PPIL6Q8IXY8 311 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.34■□□□□ 0.53
CLPX-203ENST00000558958 NAT8LQ8N9F0 302 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 SPATA22Q8NHS9 363 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 IFT81Q8WYA0 676 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 ART4Q93070 314 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 EXOC4Q96A65 974 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 MSANTD3Q96H12 275 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 OXNAD1Q96HP4 312 aaPredicted RBP18.34■□□□□ 0.53
CLPX-203ENST00000558958 PPP1R2P1Q96PQ5 205 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 SEMA3CQ99985 751 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 ANAPC5Q9UJX4 755 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 PLA2G4CQ9UP65 541 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 F5P12259 2224 aa18.34■□□□□ 0.53
CLPX-203ENST00000558958 NDC80O14777 642 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 ANXA9O76027 345 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 TUBBP07437 444 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 MMP2P08253 660 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 CES1P23141 567 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 TNFRSF8P28908 595 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 NNMTP40261 264 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 TNFRSF4P43489 277 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 VSNL1P62760 191 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 PRPSAP1Q14558 356 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 MORF4L2Q15014 288 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 DLG2Q15700 870 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 SLC44A4Q53GD3 710 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 ANKRD22Q5VYY1 191 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 C22orf39Q6P5X5 142 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 ZDHHC24Q6UX98 284 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 PRPF39Q86UA1 669 aaKnown RBP18.33■□□□□ 0.53
CLPX-203ENST00000558958 HOOK3Q86VS8 718 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 PCDH20Q8N6Y1 951 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms