RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 SLC8A2Q9UPR5 921 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 TTLL3Q9Y4R7 772 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 EDDM13A0A1B0GTR0 161 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 HACD1B0YJ81 288 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 SYNCRIPO60506 623 aaKnown RBP15.53■□□□□ 0.08
NEDD1-213ENST00000557644 ATG13O75143 517 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 GKP32189 559 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 MMP13P45452 471 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 RENBPP51606 427 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 ZNF33AQ06730 810 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 WASHC5Q12768 1159 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 RFTN1Q14699 578 aaPredicted RBP15.53■□□□□ 0.08
NEDD1-213ENST00000557644 CACUL1Q86Y37 369 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 STK40Q8N2I9 435 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 TEX26Q8N6G2 289 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 CNTD1Q8N815 330 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 NSMCE1Q8WV22 266 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 HTR3CQ8WXA8 447 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 CASKIN2Q8WXE0 1202 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 NT5MQ9NPB1 228 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 SEPT3Q9UH03 358 aa15.53■□□□□ 0.08
NEDD1-213ENST00000557644 RNF103O00237 685 aa15.52■□□□□ 0.08
NEDD1-213ENST00000557644 CAMK2GQ13555 558 aaPredicted RBP15.52■□□□□ 0.08
NEDD1-213ENST00000557644 ZNF235Q14590 738 aa15.52■□□□□ 0.08
NEDD1-213ENST00000557644 E2F5Q15329 346 aa15.52■□□□□ 0.08
NEDD1-213ENST00000557644 HEATR6Q6AI08 1181 aaKnown RBP15.52■□□□□ 0.08
NEDD1-213ENST00000557644 PCDH20Q8N6Y1 951 aaKnown RBP15.52■□□□□ 0.08
NEDD1-213ENST00000557644 FATE1Q969F0 183 aa15.52■□□□□ 0.08
NEDD1-213ENST00000557644 ISG20Q96AZ6 181 aaKnown RBP15.52■□□□□ 0.08
NEDD1-213ENST00000557644 AGAP3Q96P47 875 aa15.52■□□□□ 0.08
NEDD1-213ENST00000557644 PSKH2Q96QS6 385 aa15.52■□□□□ 0.08
NEDD1-213ENST00000557644 HHIPQ96QV1 700 aa15.52■□□□□ 0.08
NEDD1-213ENST00000557644 MKRN2Q9H000 416 aaKnown RBP15.52■□□□□ 0.08
NEDD1-213ENST00000557644 USP29Q9HBJ7 922 aa15.52■□□□□ 0.08
NEDD1-213ENST00000557644 SPATA6Q9NWH7 488 aaPredicted RBP15.52■□□□□ 0.08
NEDD1-213ENST00000557644 SUN2Q9UH99 717 aa15.52■□□□□ 0.08
NEDD1-213ENST00000557644 USP34Q70CQ2 3546 aa15.52■□□□□ 0.07
NEDD1-213ENST00000557644 CACNA1IQ9P0X4 2223 aa15.52■□□□□ 0.07
NEDD1-213ENST00000557644 ESPNB1AK53 854 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 INSIG1O15503 277 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 KCNN4O15554 427 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 HLA-DQB2P05538 268 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 PTPN3P26045 913 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 GDF10P55107 478 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 IFI35P80217 286 aaPredicted RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 BYSLQ13895 437 aaKnown RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 STARD3Q14849 445 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 OASLQ15646 514 aaKnown RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 OR2AP1Q8NGE2 309 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 MAIP1Q8WWC4 291 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 VOPP1Q96AW1 172 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 NSMCE3Q96MG7 304 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 FAM129BQ96TA1 746 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 NAP1L3Q99457 506 aaPredicted RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 IL12RB2Q99665 862 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 TCRBV21S2A2A0A5A6 115 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 BCLAF3A2AJT9 711 aaKnown RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 KIF2AO00139 706 aaPredicted RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 KRIT1O00522 736 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 URI1O94763 535 aaPredicted RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 CTSLP07711 333 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 AVPR2P30518 371 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 KCNJ1P48048 391 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 CCNHP51946 323 aaPredicted RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 COPAP53621 1224 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 CCNG2Q16589 344 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 CARD16Q5EG05 197 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 METTL3Q86U44 580 aaKnown RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 CDKL3Q8IVW4 592 aaPredicted RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 RYBPQ8N488 228 aaPredicted RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 FAM71DQ8N9W8 422 aa15.51■□□□□ 0.07
NEDD1-213ENST00000557644 EVLQ9UI08 416 aaPredicted RBP15.51■□□□□ 0.07
NEDD1-213ENST00000557644 TARSL2A2RTX5 802 aaKnown RBP15.5■□□□□ 0.07
NEDD1-213ENST00000557644 MAGEA9P43362 315 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 CXCL12P48061 93 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 PXNP49023 591 aaPredicted RBP15.5■□□□□ 0.07
NEDD1-213ENST00000557644 SCNN1BP51168 640 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 ELAVL3Q14576 367 aaKnown RBP15.5■□□□□ 0.07
NEDD1-213ENST00000557644 TEX44Q53QW1 395 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 GRIN3AQ8TCU5 1115 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 NKD2Q969F2 451 aaPredicted RBP15.5■□□□□ 0.07
NEDD1-213ENST00000557644 MGME1Q9BQP7 344 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 ZNF148Q9UQR1 794 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 CKAP5Q14008 2032 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 GPR37L1O60883 481 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 TUBB4AP04350 444 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 RECQLP46063 649 aaPredicted RBP15.5■□□□□ 0.07
NEDD1-213ENST00000557644 DGKEP52429 567 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 METAP1P53582 386 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 SNRPD1P62314 119 aaKnown RBP15.5■□□□□ 0.07
NEDD1-213ENST00000557644 ITKQ08881 620 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 POM121L1PQ3SYA9 428 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 TTC27Q6P3X3 843 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 TSSK4Q6SA08 328 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 PRUNE1Q86TP1 453 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 MMAAQ8IVH4 418 aaKnown RBP15.5■□□□□ 0.07
NEDD1-213ENST00000557644 ZNF567Q8N184 647 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 HMGB4Q8WW32 186 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 GDAP1L1Q96MZ0 367 aa15.5■□□□□ 0.07
NEDD1-213ENST00000557644 FRMD8P1Q9BZ68 369 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms