RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ENO3P13929 434 aaPredicted RBP17.97■□□□□ 0.47
XRCC3-218ENST00000557439 HNRNPLP14866 589 aaKnown RBP eCLIP17.97■□□□□ 0.47
XRCC3-218ENST00000557439 DPP6P42658 865 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 THOP1P52888 689 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 CSE1LP55060 971 aaKnown RBP17.97■□□□□ 0.47
XRCC3-218ENST00000557439 SEPT6Q14141 434 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 ZNF789Q5FWF6 425 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 FSCBQ5H9T9 825 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 TSTD2Q5T7W7 516 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 LIPMQ5VYY2 423 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 AAGABQ6PD74 315 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 ARHGAP12Q8IWW6 846 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 FAM156AQ8NDB6 213 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 NDNQ99608 321 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 RHOJQ9H4E5 214 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 CYP4F12Q9HCS2 524 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 NEU3Q9UQ49 428 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 TLL2Q9Y6L7 1015 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 TTC24A2A3L6 582 aaPredicted RBP17.96■□□□□ 0.47
XRCC3-218ENST00000557439 TMEM114B3SHH9 223 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 CCL22O00626 93 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 HDAC3O15379 428 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 XRCC1P18887 633 aaPredicted RBP17.96■□□□□ 0.47
XRCC3-218ENST00000557439 TCN1P20061 433 aaPredicted RBP17.96■□□□□ 0.47
XRCC3-218ENST00000557439 HCAR3P49019 387 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 FAM110CQ1W6H9 321 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 NAPEPLDQ6IQ20 393 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 DENND5AQ6IQ26 1287 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 AGMOQ6ZNB7 445 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 SMARCD1Q96GM5 515 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 TBL1YQ9BQ87 522 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 SLC39A8Q9C0K1 460 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 DRC3Q9H069 523 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 RAP2CQ9Y3L5 183 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 AK5Q9Y6K8 562 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 CAPN8A6NHC0 703 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 SLC1A2P43004 574 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 LHX1P48742 406 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 MRPS22P82650 360 aaKnown RBP17.96■□□□□ 0.47
XRCC3-218ENST00000557439 PM20D1Q6GTS8 502 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 LRRC8EQ6NSJ5 796 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 FBXL19Q6PCT2 694 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 ANKRD23Q86SG2 305 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 DSELQ8IZU8 1212 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 GCNAQ96QF7 691 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 KIFC1Q9BW19 673 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 BRD8Q9H0E9 1235 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 FAM96AQ9H5X1 160 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 DNAJB4Q9UDY4 337 aa17.96■□□□□ 0.47
XRCC3-218ENST00000557439 FAM95CA0A1B0GW59 222 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 ERI2A8K979 691 aaKnown RBP17.95■□□□□ 0.46
XRCC3-218ENST00000557439 B3GAT3O94766 335 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 ITGB1P05556 798 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 PLK1P53350 603 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 PRPSAP1Q14558 356 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 RBM20Q5T481 1227 aaKnown RBP17.95■□□□□ 0.46
XRCC3-218ENST00000557439 IL31Q6EBC2 164 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 ATPAF2Q8N5M1 289 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 PGAP3Q96FM1 320 aaPredicted RBP17.95■□□□□ 0.46
XRCC3-218ENST00000557439 ELMO2Q96JJ3 720 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 NPAS2Q99743 824 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 RTKNQ9BST9 563 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 KLHL4Q9C0H6 718 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 TNFRSF12AQ9NP84 129 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 PCDHGB4Q9UN71 923 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 INPP5FQ9Y2H2 1132 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 PCDHGB5Q9Y5G0 923 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 HLA-DQB2P05538 268 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 CSRP3P50461 194 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 AIF1P55008 147 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 TAS2R39P59534 338 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 CACNB2Q08289 660 aaPredicted RBP17.95■□□□□ 0.46
XRCC3-218ENST00000557439 PKN3Q6P5Z2 889 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 KBTBD6Q86V97 674 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 OR10T2Q8NGX3 314 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 PPP2R3CQ969Q6 453 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 AGO3Q9H9G7 860 aaKnown RBP17.95■□□□□ 0.46
XRCC3-218ENST00000557439 CHST12Q9NRB3 414 aa17.95■□□□□ 0.46
XRCC3-218ENST00000557439 PAGE1O75459 146 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 OR4Q2P0C623 313 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 KCNA5P22460 613 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 MS4A2Q01362 244 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 SDHAF4Q5VUM1 108 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 ZNF470Q6ECI4 717 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 CNSTQ6PJW8 725 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 TXNDC5Q8NBS9 432 aaKnown RBP17.94■□□□□ 0.46
XRCC3-218ENST00000557439 STYXQ8WUJ0 223 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 GPR78Q96P69 363 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 GBP5Q96PP8 586 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 PARK7Q99497 189 aaKnown RBP17.94■□□□□ 0.46
XRCC3-218ENST00000557439 TRPV6Q9H1D0 765 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 PAPOLBQ9NRJ5 636 aaKnown RBP17.94■□□□□ 0.46
XRCC3-218ENST00000557439 CDH9Q9ULB4 789 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 ACOT9Q9Y305 439 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 MAGEB16A2A368 324 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 TARM1B6A8C7 271 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 MTSS1O43312 755 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 MYCNP04198 464 aaPredicted RBP17.94■□□□□ 0.46
XRCC3-218ENST00000557439 GRIA2P42262 883 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 SLC12A1Q13621 1099 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms