RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 FAM172AQ8WUF8 416 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 TBC1D31Q96DN5 1066 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 RAB6CQ9H0N0 254 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 OSBPL2Q9H1P3 480 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 SEPT11Q9NVA2 429 aaKnown RBP14.45□□□□□ -0.1
SNX6-210ENST00000557341 TMEM248Q9NWD8 314 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 ADAM22Q9P0K1 906 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 DKK4Q9UBT3 224 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 NEU3Q9UQ49 428 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 CA5BQ9Y2D0 317 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 FCF1Q9Y324 198 aaKnown RBP14.45□□□□□ -0.1
SNX6-210ENST00000557341 LRP4O75096 1905 aa14.45□□□□□ -0.1
SNX6-210ENST00000557341 FAM149AA5PLN7 773 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 RNF103O00237 685 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 ZNF821O75541 412 aaPredicted RBP14.44□□□□□ -0.1
SNX6-210ENST00000557341 LRIG2O94898 1065 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 GJB6O95452 261 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 C1SP09871 688 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 THEGLP0DJG4 465 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 ADRB3P13945 408 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 GPD1P21695 349 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 ACVRL1P37023 503 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 DNA2P51530 1060 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 HDAC4P56524 1084 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 UBXN1Q04323 297 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 DNAJC3Q13217 504 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 CLEC16AQ2KHT3 1053 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 CARD16Q5EG05 197 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 KIAA1161Q6NSJ0 714 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 KANSL1Q7Z3B3 1105 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 NLRP14Q86W24 1093 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 TMPRSS12Q86WS5 348 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 PHF13Q86YI8 300 aaPredicted RBP14.44□□□□□ -0.1
SNX6-210ENST00000557341 CCDC185Q8N715 623 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 CENPIQ92674 756 aaPredicted RBP14.44□□□□□ -0.1
SNX6-210ENST00000557341 KLK6Q92876 244 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 ARHGEF2Q92974 986 aaKnown RBP14.44□□□□□ -0.1
SNX6-210ENST00000557341 NTAN1Q96AB6 310 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 HEPHQ9BQS7 1158 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 CALN1Q9BXU9 219 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 TM6SF2Q9BZW4 377 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 ZDHHC6Q9H6R6 413 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 FZD3Q9NPG1 666 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 NDFIP2Q9NV92 336 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 DNAI1Q9UI46 699 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 HPCAL4Q9UM19 191 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 LHX6Q9UPM6 363 aa14.44□□□□□ -0.1
SNX6-210ENST00000557341 ZFR2Q9UPR6 939 aaKnown RBP14.44□□□□□ -0.1
SNX6-210ENST00000557341 KNTC1P50748 2209 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 FAM72CH0Y354 149 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 RAMP2O60895 175 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 SDC3O75056 442 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 PLEKP08567 350 aaPredicted RBP14.43□□□□□ -0.1
SNX6-210ENST00000557341 CDK11BP21127 795 aaKnown RBP14.43□□□□□ -0.1
SNX6-210ENST00000557341 L1CAMP32004 1257 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 RFC1P35251 1148 aaPredicted RBP14.43□□□□□ -0.1
SNX6-210ENST00000557341 CAMK2BQ13554 666 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 POLD3Q15054 466 aaPredicted RBP14.43□□□□□ -0.1
SNX6-210ENST00000557341 TMEM259Q4ZIN3 620 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 FAM72AQ5TYM5 149 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 SEL1L3Q68CR1 1132 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 FAM72DQ6L9T8 149 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 FBXL19Q6PCT2 694 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 GCNT7Q6ZNI0 430 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 MON1BQ7L1V2 547 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 PARS2Q7L3T8 475 aaKnown RBP14.43□□□□□ -0.1
SNX6-210ENST00000557341 FAM72BQ86X60 149 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 MARCH9Q86YJ5 346 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 PDCD7Q8N8D1 485 aaKnown RBP14.43□□□□□ -0.1
SNX6-210ENST00000557341 FAM174AQ8TBP5 190 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 TSC1Q92574 1164 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 ISG20Q96AZ6 181 aaKnown RBP14.43□□□□□ -0.1
SNX6-210ENST00000557341 ERGIC2Q96RQ1 377 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 PCDHB18PQ96TA0 734 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 MAGEH1Q9H213 219 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 ACTL7AQ9Y615 435 aa14.43□□□□□ -0.1
SNX6-210ENST00000557341 ANKRD62A6NC57 917 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 TRABD2BA6NFA1 517 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 A6NNZ2 444 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 AP1G1O43747 822 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 CD160O95971 181 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 MBD3O95983 291 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 SNRPD1P62314 119 aaKnown RBP14.42□□□□□ -0.1
SNX6-210ENST00000557341 RPS21P63220 83 aaKnown RBP14.42□□□□□ -0.1
SNX6-210ENST00000557341 C1QBPQ07021 282 aaKnown RBP14.42□□□□□ -0.1
SNX6-210ENST00000557341 ILKQ13418 452 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 HS1BP3Q53T59 392 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 EFHC2Q5JST6 749 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 DNAJC24Q6P3W2 148 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 WDR59Q6PJI9 974 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 PTAR1Q7Z6K3 402 aaPredicted RBP14.42□□□□□ -0.1
SNX6-210ENST00000557341 ABI3BPQ7Z7G0 1075 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 SLFN11Q7Z7L1 901 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 ZSCAN30Q86W11 494 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 PLPP6Q8IY26 295 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 RYBPQ8N488 228 aaPredicted RBP14.42□□□□□ -0.1
SNX6-210ENST00000557341 OR13H1Q8NG92 308 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 OR2AP1Q8NGE2 309 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 NXPE2Q96DL1 559 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 LRIG1Q96JA1 1093 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms