RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 J3QL48 77 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 RNF103O00237 685 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 ALOX15BO15296 676 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 MID1O15344 667 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 DAPK3O43293 454 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 PRAMEF11O60813 436 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 CTSLP07711 333 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 KDELR1P24390 212 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 CD6P30203 668 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 OXTRP30559 389 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 SLC8A1P32418 973 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 ARL4AP40617 200 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 SSR1P43307 286 aaKnown RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 NOP2P46087 812 aaKnown RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 SMCPP49901 116 aaPredicted RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 PAPOLAP51003 745 aaKnown RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 VAV2P52735 878 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 PDK2Q15119 407 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 CYTH1Q15438 398 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 CST6Q15828 149 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 TAZQ16635 292 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 INO80DQ53TQ3 878 aaPredicted RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 ANKRD20A8PQ5CZ79 823 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 C22orf39Q6P5X5 142 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 LEKR1Q6ZMV7 388 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 DPY19L3Q6ZPD9 716 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 ALYREFQ86V81 257 aaKnown RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 DCLK2Q8N568 766 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 AADATQ8N5Z0 425 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 PCDH20Q8N6Y1 951 aaKnown RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 PQLC3Q8N755 202 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 NETO2Q8NC67 525 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 CHST14Q8NCH0 376 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 TPCN2Q8NHX9 752 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 RUBCNQ92622 972 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 TOE1Q96GM8 510 aaKnown RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 ZNF419Q96HQ0 510 aaPredicted RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 SPACA7Q96KW9 195 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 CALR3Q96L12 384 aaKnown RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 ZNF670Q9BS34 389 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 PABPC3Q9H361 631 aaKnown RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 GOLPH3Q9H4A6 298 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 LUC7LQ9NQ29 371 aaKnown RBP9.83□□□□□ -0.84
SRP54-210ENST00000556380 SERGEFQ9UGK8 458 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 SCML1Q9UN30 329 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 NUMA1Q14980 2115 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 LAMA1P25391 3075 aa9.83□□□□□ -0.84
SRP54-210ENST00000556380 PLXND1Q9Y4D7 1925 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 DMXL1Q9Y485 3027 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 GOLGA6L3A6NEY3 463 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 ARHGAP42A6NI28 874 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 ZNF487B1APH4 448 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 BUB1O43683 1085 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 RNASEH1O60930 286 aaKnown RBP9.82□□□□□ -0.84
SRP54-210ENST00000556380 RHOBTB1O94844 696 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 EPN2O95208 641 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 PEX11BO96011 259 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 DNTTP04053 509 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 C5AR1P21730 350 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 CHRNA3P32297 505 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 ACSL1P33121 698 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 DRD3P35462 400 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 PTGER3P43115 390 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 METAP1P53582 386 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 GEMIN4P57678 1058 aaKnown RBP9.82□□□□□ -0.84
SRP54-210ENST00000556380 KRT81Q14533 505 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 PAFAH1B3Q15102 231 aaKnown RBP9.82□□□□□ -0.84
SRP54-210ENST00000556380 CARD16Q5EG05 197 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 C11orf63Q6NUN7 778 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 SLC36A4Q6YBV0 504 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 ARHGAP36Q6ZRI8 547 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 USP30Q70CQ3 517 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 LPCAT2Q7L5N7 544 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 VSIG1Q86XK7 387 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 CACUL1Q86Y37 369 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 SLC41A1Q8IVJ1 513 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 TMEFF1Q8IYR6 380 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 LRRC57Q8N9N7 239 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 KCTD6Q8NC69 237 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 TMIEQ8NEW7 156 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 CASKIN2Q8WXE0 1202 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 OR8D1Q8WZ84 308 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 RNF157Q96PX1 679 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 DESI2Q9BSY9 194 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 TNKS2Q9H2K2 1166 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 PARD6AQ9NPB6 346 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 KLHL11Q9NVR0 708 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 FBXL12Q9NXK8 326 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 IPO11Q9UI26 975 aaKnown RBP9.82□□□□□ -0.84
SRP54-210ENST00000556380 RAB23Q9ULC3 237 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 HPCAL4Q9UM19 191 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 WASF2Q9Y6W5 498 aa9.82□□□□□ -0.84
SRP54-210ENST00000556380 BCLAF3A2AJT9 711 aaKnown RBP9.81□□□□□ -0.84
SRP54-210ENST00000556380 GOLGA6L6A8MZA4 724 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 TMCC1O94876 653 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 IPO7O95373 1038 aaKnown RBP9.81□□□□□ -0.84
SRP54-210ENST00000556380 GSRP00390 522 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 IL1BP01584 269 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 ACADMP11310 421 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms