RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 METAP1P53582 386 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 ADPRHP54922 357 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 ADKP55263 362 aaKnown RBP11.76□□□□□ -0.53
SLIRP-205ENST00000556310 DPYSL2Q16555 572 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 DAB2IPQ5VWQ8 1189 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 KIAA0895LQ68EN5 471 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 RFX8Q6ZV50 586 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 ERMP1Q7Z2K6 904 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 OR2T34Q8NGX1 318 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 ZNF564Q8TBZ8 553 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-205ENST00000556310 CTNNBL1Q8WYA6 563 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-205ENST00000556310 SNX19Q92543 992 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 WNT2BQ93097 391 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 ISG20Q96AZ6 181 aaKnown RBP11.76□□□□□ -0.53
SLIRP-205ENST00000556310 BIRC7Q96CA5 298 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 MIR1-1HGQ9H1L0 117 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 NEUROG2Q9H2A3 272 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 TNKS2Q9H2K2 1166 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 UVRAGQ9P2Y5 699 aa11.76□□□□□ -0.53
SLIRP-205ENST00000556310 EIF2B4Q9UI10 523 aaKnown RBP11.76□□□□□ -0.53
SLIRP-205ENST00000556310 ASCC3Q8N3C0 2202 aaKnown RBP11.76□□□□□ -0.53
SLIRP-205ENST00000556310 RASA4BC9J798 803 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 AKR1B15C9JRZ8 316 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-205ENST00000556310 MYO1FO00160 1098 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 BCAT2O15382 392 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-205ENST00000556310 RASA4O43374 803 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 KDELR3O43731 214 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 FSBPO95073 299 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 IGHV4-34P06331 123 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 H2AFZP0C0S5 128 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 TCF4P15884 667 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 CD27P26842 260 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 IL1R2P27930 398 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 HCAR3P49019 387 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 SLC25A11Q02978 314 aaKnown RBP11.75□□□□□ -0.53
SLIRP-205ENST00000556310 SERINC3Q13530 473 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 BOLA3Q53S33 107 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 PPP6R3Q5H9R7 873 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-205ENST00000556310 AGBL4Q5VU57 503 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 NCEH1Q6PIU2 408 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 DPY19L3Q6ZPD9 716 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 H2AFVQ71UI9 128 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 DGLUCYQ7Z3D6 616 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 ZNF354CQ86Y25 554 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 CHST14Q8NCH0 376 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 TMIEQ8NEW7 156 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 C1orf216Q8TAB5 229 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 GRIN3AQ8TCU5 1115 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 TEKT4Q8WW24 435 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 CASKIN2Q8WXE0 1202 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 HMCESQ96FZ2 354 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 BTBD6Q96KE9 485 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 CCDC42Q96M95 316 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 CHP1Q99653 195 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 PACSIN1Q9BY11 444 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 RBSNQ9H1K0 784 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 LRRC19Q9H756 370 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 ZWILCHQ9H900 591 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 NHEJ1Q9H9Q4 299 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-205ENST00000556310 OSGEPQ9NPF4 335 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.75□□□□□ -0.53
SLIRP-205ENST00000556310 CTTNBP2NLQ9P2B4 639 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 IL36AQ9UHA7 158 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 LCMT1Q9UIC8 334 aa11.75□□□□□ -0.53
SLIRP-205ENST00000556310 TPX2Q9ULW0 747 aaKnown RBP11.75□□□□□ -0.53
SLIRP-205ENST00000556310 FCF1Q9Y324 198 aaKnown RBP11.75□□□□□ -0.53
SLIRP-205ENST00000556310 NCOR2Q9Y618 2525 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 FAM47DPA6NHR8 397 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 C4orf47A7E2U8 309 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 H3BRJ5 948 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 KPNA3O00505 521 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-205ENST00000556310 CDX4O14627 284 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-205ENST00000556310 DAPK3O43293 454 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 PLRG1O43660 514 aaKnown RBP11.74□□□□□ -0.53
SLIRP-205ENST00000556310 TMCC1O94876 653 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 GSRP00390 522 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 SYPP08247 313 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 TMEM253P0C7T8 217 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 ERCC2P18074 760 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 ARL4AP40617 200 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 MAPK8P45983 427 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 CCR5P51681 352 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 CCNHP51946 323 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-205ENST00000556310 NDST2P52849 883 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 ATXN3P54252 364 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-205ENST00000556310 CNTN1Q12860 1018 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 GRIK2Q13002 908 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 DPYSQ14117 519 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 SMTNL2Q2TAL5 461 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 POM121L1PQ3SYA9 428 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 CARD16Q5EG05 197 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 KCNT1Q5JUK3 1230 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-205ENST00000556310 OR2AP1Q8NGE2 309 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 OR14C36Q8NHC7 312 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 MRFAP1L1Q96HT8 127 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 PPP1R16AQ96I34 528 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 ORAI3Q9BRQ5 295 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 TM6SF2Q9BZW4 377 aa11.74□□□□□ -0.53
SLIRP-205ENST00000556310 ZDHHC5Q9C0B5 715 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms