RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SPANXN3Q5MJ09 141 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 RASIP1Q5U651 963 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 SDHAF4Q5VUM1 108 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 C6orf89Q6UWU4 347 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 CAPN12Q6ZSI9 719 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 C14orf80Q86SX3 495 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 LINC00523Q86TU6 105 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 PRPF39Q86UA1 669 aaKnown RBP8.46□□□□□ -1.06
ATXN3-235ENST00000556082 TMEM135Q86UB9 458 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 CCDC117Q8IWD4 279 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-235ENST00000556082 CMTR2Q8IYT2 770 aaKnown RBP8.46□□□□□ -1.06
ATXN3-235ENST00000556082 SLC39A11Q8N1S5 342 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 CCDC33Q8N5R6 958 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 TTC9BQ8N6N2 239 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 CNTD1Q8N815 330 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 BANPQ8N9N5 519 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 ZNF461Q8TAF7 563 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 GRAMD1AQ96CP6 724 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 CFAP36Q96G28 342 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 OXNAD1Q96HP4 312 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-235ENST00000556082 SEC16BQ96JE7 1060 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 B3GALT6Q96L58 329 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 PGLYRP2Q96PD5 576 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 FCRL5Q96RD9 977 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 VN1R3Q9BXE9 311 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 ZYG11BQ9C0D3 744 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 SLC39A8Q9C0K1 460 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 NSRP1Q9H0G5 558 aaKnown RBP8.46□□□□□ -1.06
ATXN3-235ENST00000556082 SIK2Q9H0K1 926 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 LRRC40Q9H9A6 602 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 RC3H2Q9HBD1 1191 aaKnown RBP8.46□□□□□ -1.06
ATXN3-235ENST00000556082 TMEM248Q9NWD8 314 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 MKS1Q9NXB0 559 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 SEPT10Q9P0V9 454 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 RSPH14Q9UHP6 348 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 AAR2Q9Y312 384 aaKnown RBP8.46□□□□□ -1.06
ATXN3-235ENST00000556082 MAD1L1Q9Y6D9 718 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 CDY1Q9Y6F8 540 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 FAM237BA0A1B0GVD1 139 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 A0A1W2PPM1 405 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 WDR27A2RRH5 827 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 ARHGAP42A6NI28 874 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 FOXO6A8MYZ6 492 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 NT5C1B-RDH14C9J2C7 533 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 ANXA9O76027 345 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 TIMP1P01033 207 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 POLBP06746 335 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 ATF6P18850 670 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 ARPP19P56211 112 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 YBEYP58557 167 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-235ENST00000556082 EFEMP1Q12805 493 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 ZBTB17Q13105 803 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 RAB33AQ14088 237 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 HNRNPDQ14103 355 aaKnown RBP8.45□□□□□ -1.06
ATXN3-235ENST00000556082 ITIH4Q14624 930 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 EFTUD2Q15029 972 aaKnown RBP eCLIP8.45□□□□□ -1.06
ATXN3-235ENST00000556082 PSMD5Q16401 504 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 ANO4Q32M45 955 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 MS4A13Q5J8X5 152 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 C10orf120Q5SQS8 335 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 STXBP5Q5T5C0 1151 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 PIK3R6Q5UE93 754 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 KIAA1841Q6NSI8 718 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 FBXO46Q6PJ61 603 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-235ENST00000556082 PRSS55Q6UWB4 352 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-235ENST00000556082 MARK2Q7KZI7 788 aaKnown RBP8.45□□□□□ -1.06
ATXN3-235ENST00000556082 RAB44Q7Z6P3 723 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-235ENST00000556082 DEFB128Q7Z7B8 93 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 DDX53Q86TM3 631 aaKnown RBP8.45□□□□□ -1.06
ATXN3-235ENST00000556082 LRRC34Q8IZ02 419 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 MPP5Q8N3R9 675 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 Q8N3U1 123 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 ATPAF2Q8N5M1 289 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 PPM1NQ8N819 430 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 ACMSDQ8TDX5 336 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 DYDC1Q8WWB3 177 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 TRMT2BQ96GJ1 504 aaKnown RBP8.45□□□□□ -1.06
ATXN3-235ENST00000556082 ZNF558Q96NG5 402 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 SEPT5Q99719 369 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-235ENST00000556082 CLSTN3Q9BQT9 956 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 PLCD4Q9BRC7 762 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 MLPHQ9BV36 600 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-235ENST00000556082 HERC2P3Q9BVR0 1158 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 IL22Q9GZX6 179 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 VPS11Q9H270 941 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 C11orf49Q9H6J7 331 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 GLOD4Q9HC38 313 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 BFARQ9NZS9 450 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 ZNF212Q9UDV6 495 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 NR2E3Q9Y5X4 410 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 FAM169AQ9Y6X4 670 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 PLXNA3P51805 1871 aa8.45□□□□□ -1.06
ATXN3-235ENST00000556082 SLC12A8A0AV02 714 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 ZNF840PA6NDX5 716 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 CXorf49A8MYA2 514 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-235ENST00000556082 TCP11X1B4DZS4 312 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 DFFAO00273 331 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 ADAM12O43184 909 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 USP1O94782 785 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 BAIAP3O94812 1187 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms