RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 NAA35Q5VZE5 725 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 PAPD7Q5XG87 772 aaKnown RBP3.67□□□□□ -1.82
SRP54-209ENST00000555746 RETSATQ6NUM9 610 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 AADACL2Q6P093 401 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 MIS18BP1Q6P0N0 1132 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 SLC30A9Q6PML9 568 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 ESX1Q8N693 406 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 LSM14AQ8ND56 463 aaKnown RBP3.67□□□□□ -1.82
SRP54-209ENST00000555746 C2CD4CQ8TF44 421 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 NTN5Q8WTR8 489 aaPredicted RBP3.67□□□□□ -1.82
SRP54-209ENST00000555746 KCNJ9Q92806 393 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 SH3KBP1Q96B97 665 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 ADAD1Q96M93 576 aaKnown RBP3.67□□□□□ -1.82
SRP54-209ENST00000555746 PHF7Q9BWX1 381 aaPredicted RBP3.67□□□□□ -1.82
SRP54-209ENST00000555746 GPR63Q9BZJ6 419 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 TAOK3Q9H2K8 898 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 STN1Q9H668 368 aaKnown RBP3.67□□□□□ -1.82
SRP54-209ENST00000555746 MOV10Q9HCE1 1003 aaKnown RBP3.67□□□□□ -1.82
SRP54-209ENST00000555746 PDGFCQ9NRA1 345 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.67□□□□□ -1.82
SRP54-209ENST00000555746 SLC25A13Q9UJS0 675 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 ANAPC4Q9UJX5 808 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 NCOR1O75376 2440 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 RIMS2Q9UQ26 1411 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 KIAA0100Q14667 2235 aaKnown RBP3.67□□□□□ -1.82
SRP54-209ENST00000555746 LRRIQ1Q96JM4 1722 aa3.67□□□□□ -1.82
SRP54-209ENST00000555746 PHRF1Q9P1Y6 1649 aaKnown RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 TMEM247A6NEH6 219 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 FAM90A7PA6NKC0 464 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 FAM90A22PA8MWA6 464 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 FAM90A12PA8MX19 464 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 FAM90A23PA8MXZ1 464 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 MASP2O00187 686 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 TP73O15350 636 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 ANP32CO43423 234 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 WNT1P04628 370 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 CELA2AP08217 269 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 CPA1P15085 419 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 XBP1P17861 261 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 ATP5F1P24539 256 aaPredicted RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 CD38P28907 300 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 EPHB2P29323 1055 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 STAT1P42224 750 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 RPS13P62277 151 aaKnown RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 ARHGAP8P85298 464 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 ZBTB16Q05516 673 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 MAPK7Q13164 816 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 BYSLQ13895 437 aaKnown RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 PGM5Q15124 567 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 PLK5Q496M5 336 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 GJB7Q6PEY0 223 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 SYCE2Q6PIF2 218 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 LRRC8DQ7L1W4 858 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 NEK8Q86SG6 692 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 DNAJC10Q8IXB1 793 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 VPS52Q8N1B4 723 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 NCSTNQ92542 709 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 RNFT2Q96EX2 444 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 CLMNQ96JQ2 1002 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 NAP1L4Q99733 375 aaKnown RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 EIF2AK1Q9BQI3 630 aaKnown RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 PIMREGQ9BSJ6 248 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 FRMD8Q9BZ67 464 aaPredicted RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 Q9N2J8 555 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 UBN1Q9NPG3 1134 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 TLR8Q9NR97 1041 aaKnown RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 ADARB2Q9NS39 739 aaKnown RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 ARL15Q9NXU5 204 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 IFT80Q9P2H3 777 aaPredicted RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 KLHL13Q9P2N7 655 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 TBX20Q9UMR3 447 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 SUFUQ9UMX1 484 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 TNFSF13BQ9Y275 285 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 LAS1LQ9Y4W2 734 aaKnown RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 OVOS2A0A0G2JMS6 1433 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 OVOS2A0A0J9YW53 1432 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 OVOS2Q6IE36 1432 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 PARP4Q9UKK3 1724 aaKnown RBP3.66□□□□□ -1.82
SRP54-209ENST00000555746 IGSF1Q8N6C5 1336 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 PRXQ9BXM0 1461 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 MBD5Q9P267 1494 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 NRXN3Q9Y4C0 1643 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 LAMB4A4D0S4 1761 aa3.66□□□□□ -1.82
SRP54-209ENST00000555746 BCL9O00512 1426 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 SMIM35A0A1B0GVV1 85 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 SH2D7A6NKC9 451 aaPredicted RBP3.65□□□□□ -1.83
SRP54-209ENST00000555746 E5RJQ4 531 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 PEX12O00623 359 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 SYN3O14994 580 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 CNOT3O75175 753 aaKnown RBP3.65□□□□□ -1.83
SRP54-209ENST00000555746 TULP3O75386 442 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 LCKP06239 509 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 CTSAP10619 480 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 MPGP29372 298 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 TYK2P29597 1187 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 HNF1BP35680 557 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 MTNR1AP48039 350 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 TUBP50607 506 aa3.65□□□□□ -1.83
SRP54-209ENST00000555746 NANOS3P60323 173 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms