RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NPIPB13A6NJU9 1138 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 NPIPB5A8MRT5 1133 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 NPIPB4C9JG80 1138 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 HLA-DQA2P01906 255 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 ENO3P13929 434 aaPredicted RBP3.79□□□□□ -1.8
SNX6-204ENST00000555541 PDIA3P30101 505 aaKnown RBP3.79□□□□□ -1.8
SNX6-204ENST00000555541 MXI1P50539 228 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 PNLIPRP1P54315 467 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 GALNT1Q10472 559 aaPredicted RBP3.79□□□□□ -1.8
SNX6-204ENST00000555541 PFKFB4Q16877 469 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 ZACNQ401N2 412 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 GALNTL6Q49A17 601 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 SETMARQ53H47 684 aaPredicted RBP3.79□□□□□ -1.8
SNX6-204ENST00000555541 PGBD2Q6P3X8 592 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 RNF144BQ7Z419 303 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 MIGA1Q8NAN2 632 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 SCAMP5Q8TAC9 235 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 WBP2Q969T9 261 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 FRG2BQ96QU4 278 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 PIGSQ96S52 555 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 C1QTNF5Q9BXJ0 243 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 WDR12Q9GZL7 423 aaKnown RBP3.79□□□□□ -1.8
SNX6-204ENST00000555541 BRD8Q9H0E9 1235 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 PABPC3Q9H361 631 aaKnown RBP3.79□□□□□ -1.8
SNX6-204ENST00000555541 ELAC1Q9H777 363 aaKnown RBP3.79□□□□□ -1.8
SNX6-204ENST00000555541 SEPSECSQ9HD40 501 aaKnown RBP3.79□□□□□ -1.8
SNX6-204ENST00000555541 CHST12Q9NRB3 414 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 CDH22Q9UJ99 828 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 OSGIN2Q9Y236 505 aa3.79□□□□□ -1.8
SNX6-204ENST00000555541 SRPRBQ9Y5M8 271 aaKnown RBP3.79□□□□□ -1.8
SNX6-204ENST00000555541 IGLV5-37A0A075B6J1 123 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 A0A0U1RQJ8 604 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 ERI2A8K979 691 aaKnown RBP3.78□□□□□ -1.8
SNX6-204ENST00000555541 SKAP2O75563 359 aaPredicted RBP3.78□□□□□ -1.8
SNX6-204ENST00000555541 SERPINI2O75830 405 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 CYP21A2P08686 494 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 CFC1BP0CG36 223 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 CFC1P0CG37 223 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 FCGR2AP12318 317 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 GSTM2P28161 218 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 SERPINB3P29508 390 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 SERPINA4P29622 427 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 SERPINF1P36955 418 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 AP2B1P63010 937 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 TNFAIP2Q03169 654 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 DLG1Q12959 904 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 ALKBH1Q13686 389 aaKnown RBP3.78□□□□□ -1.8
SNX6-204ENST00000555541 DCTN1Q14203 1278 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 GXYLT1Q4G148 440 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 EFHC1Q5JVL4 640 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 CEP85LQ5SZL2 805 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 LIN54Q6MZP7 749 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 ADAM5Q6NVV9 412 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 RINLQ6ZS11 566 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 C9orf139Q6ZV77 190 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 SERPINA11Q86U17 422 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 DCUN1D3Q8IWE4 304 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 SCN4BQ8IWT1 228 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 RBFAQ8N0V3 343 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 NAGSQ8N159 534 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 VPS52Q8N1B4 723 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 GPT2Q8TD30 523 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 C2CD4CQ8TF44 421 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 SORCS1Q8WY21 1168 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 CPT1BQ92523 772 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 KCNJ9Q92806 393 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 ARRDC3Q96B67 414 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 ADGRG7Q96K78 797 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 IL17FQ96PD4 163 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 GFM1Q96RP9 751 aaKnown RBP3.78□□□□□ -1.8
SNX6-204ENST00000555541 MSTO1Q9BUK6 570 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 TRIM31Q9BZY9 425 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 ABHD16BQ9H3Z7 469 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 RCE1Q9Y256 329 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 LRCH1Q9Y2L9 728 aa3.78□□□□□ -1.8
SNX6-204ENST00000555541 C17orf102A2RUQ5 167 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 MAGEA13PA6NCF6 341 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 TMEM247A6NEH6 219 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 RNMTO43148 476 aaKnown RBP3.77□□□□□ -1.81
SNX6-204ENST00000555541 HNRNPRO43390 633 aaKnown RBP3.77□□□□□ -1.81
SNX6-204ENST00000555541 LMX1BO60663 402 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 DDAH2O95865 285 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 AFPP02771 609 aaKnown RBP3.77□□□□□ -1.81
SNX6-204ENST00000555541 IFIT2P09913 472 aaKnown RBP3.77□□□□□ -1.81
SNX6-204ENST00000555541 TAF6P49848 677 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 ADORA2A-AS1P86434 159 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 MYBPHQ13203 477 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 SNTA1Q13424 505 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 RPS6KA2Q15349 733 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 MAP9Q49MG5 647 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 TBC1D9BQ66K14 1250 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 DGAT2L7PQ6IED9 249 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 KLHL17Q6TDP4 642 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 TOGARAM2Q6ZUX3 1019 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 PGBD5Q8N414 524 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 POC1AQ8NBT0 407 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 FAR1Q8WVX9 515 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 CLK4Q9HAZ1 481 aaKnown RBP3.77□□□□□ -1.81
SNX6-204ENST00000555541 NDUFAF4Q9P032 175 aa3.77□□□□□ -1.81
SNX6-204ENST00000555541 NOTCH2Q04721 2471 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms