RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ARHGAP33O14559 1287 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 FGF10O15520 208 aaPredicted RBP13.92□□□□□ -0.18
SNX6-203ENST00000555416 PLRG1O43660 514 aaKnown RBP13.92□□□□□ -0.18
SNX6-203ENST00000555416 TMCC1O94876 653 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 DESP17661 470 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 SDHBP21912 280 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 CD27P26842 260 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 ZNF75DP51815 510 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 YBEYP58557 167 aaPredicted RBP13.92□□□□□ -0.18
SNX6-203ENST00000555416 TAS2R40P59535 323 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 ACAP1Q15027 740 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 DPYSL2Q16555 572 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 UAP1L1Q3KQV9 507 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 FAM46CQ5VWP2 391 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 ZNF354CQ86Y25 554 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 PSTKQ8IV42 348 aaKnown RBP13.92□□□□□ -0.18
SNX6-203ENST00000555416 MINDY1Q8N5J2 469 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 TMIEQ8NEW7 156 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 ISG20Q96AZ6 181 aaKnown RBP13.92□□□□□ -0.18
SNX6-203ENST00000555416 IL21RQ9HBE5 538 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 PDFQ9HBH1 243 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 PCDH18Q9HCL0 1135 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.92□□□□□ -0.18
SNX6-203ENST00000555416 ZNHIT6Q9NWK9 470 aaKnown RBP13.92□□□□□ -0.18
SNX6-203ENST00000555416 CTTNBP2NLQ9P2B4 639 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 IL36AQ9UHA7 158 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 NCOR2Q9Y618 2525 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 TBC1D3DA0A087WVF3 549 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 TBC1D3IA0A087WXS9 549 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 TBC1D3EA0A087X179 549 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 TBC1D3KA0A087X1G2 549 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 A0A1W2PPC4 97 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 TBC1D3FA6NER0 549 aaPredicted RBP13.91□□□□□ -0.18
SNX6-203ENST00000555416 LRRC72A6NJI9 287 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 EIF3CLB5ME19 914 aaKnown RBP13.91□□□□□ -0.18
SNX6-203ENST00000555416 TBC1D3LB9A6J9 549 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 C1QTNF3-AMACRE9PGA6 284 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 MYO1FO00160 1098 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 GIPC1O14908 333 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 AKR1B10O60218 316 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 GJB3O75712 270 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 WNT1P04628 370 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 CD48P09326 243 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 H2AFZP0C0S5 128 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 TBC1D3HP0C7X1 549 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 GNSP15586 552 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 AMPD1P23109 780 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 HTR7P34969 479 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 HCAR3P49019 387 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 PAPOLAP51003 745 aaKnown RBP13.91□□□□□ -0.18
SNX6-203ENST00000555416 CCR5P51681 352 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 MMRN1Q13201 1228 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 CYTH1Q15438 398 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 PARP15Q460N3 678 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 TBC1D3GQ6DHY5 549 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 TBC1D3CQ6IPX1 549 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 H2AFVQ71UI9 128 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 POLNQ7Z5Q5 900 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 TBC1D3Q8IZP1 549 aaPredicted RBP13.91□□□□□ -0.18
SNX6-203ENST00000555416 TSC1Q92574 1164 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 SLC6A18Q96N87 628 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 CSPG4P5Q96PW8 444 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 EIF3CQ99613 913 aaKnown RBP13.91□□□□□ -0.18
SNX6-203ENST00000555416 HEPHQ9BQS7 1158 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 DEF6Q9H4E7 631 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 ZDHHC6Q9H6R6 413 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 HECAQ9UBI9 543 aaPredicted RBP13.91□□□□□ -0.18
SNX6-203ENST00000555416 LHX3Q9UBR4 397 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 SUSD2Q9UGT4 822 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 HPCAL4Q9UM19 191 aa13.91□□□□□ -0.18
SNX6-203ENST00000555416 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
SNX6-203ENST00000555416 CXorf51AA0A1B0GTR3 108 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 TMEM110-MUSTN1A8MSY1 372 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 KCNK3O14649 394 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 INSIG1O15503 277 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 DAPK3O43293 454 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 LATO43561 262 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 PRAMEF11O60813 436 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 PROSCO94903 275 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 PRNPP04156 253 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 TPM1P09493 284 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 TMEM253P0C7T8 217 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 IL4RP24394 825 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 MAT2AP31153 395 aaKnown RBP13.9□□□□□ -0.18
SNX6-203ENST00000555416 RECQLP46063 649 aaPredicted RBP13.9□□□□□ -0.18
SNX6-203ENST00000555416 RGRP47804 291 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 ARSEP51690 589 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 NDST2P52849 883 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 SFSWAPQ12872 951 aaKnown RBP13.9□□□□□ -0.18
SNX6-203ENST00000555416 KIF19Q2TAC6 998 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 MYLK3Q32MK0 819 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 BOLA3Q53S33 107 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 PPM1JQ5JR12 505 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 PARS2Q7L3T8 475 aaKnown RBP13.9□□□□□ -0.18
SNX6-203ENST00000555416 RABEPKQ7Z6M1 372 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 CNGA4Q8IV77 575 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 PLPP6Q8IY26 295 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 OR2AP1Q8NGE2 309 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 TEKT4Q8WW24 435 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 CTNNBL1Q8WYA6 563 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms