RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 RETSATQ6NUM9 610 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 ART4Q93070 314 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 BRD8Q9H0E9 1235 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 GDE1Q9NZC3 331 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 PRAMEF11O60813 436 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 ADH1CP00326 375 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 CPP00450 1065 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 HTR7P34969 479 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 ELK3P41970 407 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 NIPAL4Q0D2K0 466 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 NR1H3Q13133 447 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 DNAJC21Q5F1R6 531 aaKnown RBP10.36□□□□□ -0.75
NEK9-205ENST00000555405 PITRM1Q5JRX3 1037 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 PRPF38BQ5VTL8 546 aaKnown RBP10.36□□□□□ -0.75
NEK9-205ENST00000555405 MBLAC2Q68D91 279 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 HDXQ7Z353 690 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 SETD3Q86TU7 594 aaPredicted RBP10.36□□□□□ -0.75
NEK9-205ENST00000555405 MPP5Q8N3R9 675 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 OTUD6BQ8N6M0 293 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 FBXO36Q8NEA4 188 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 OSCP1Q8WVF1 389 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 PRCCQ92733 491 aaPredicted RBP10.36□□□□□ -0.75
NEK9-205ENST00000555405 EXOC4Q96A65 974 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 AZIN2Q96A70 460 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 S1PR5Q9H228 398 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 CDC42EP4Q9H3Q1 356 aaKnown RBP10.36□□□□□ -0.75
NEK9-205ENST00000555405 ECT2Q9H8V3 914 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 SCUBE2Q9NQ36 999 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 ZDHHC18Q9NUE0 388 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 SEPT3Q9UH03 358 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 GGA2Q9UJY4 613 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 PLA2G4CQ9UP65 541 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 SHOC2Q9UQ13 582 aa10.36□□□□□ -0.75
NEK9-205ENST00000555405 NFATC1O95644 943 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 ECHS1P30084 290 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 NNMTP40261 264 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 WNT3AP56704 352 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 ARF5P84085 180 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 NRG1Q02297 640 aaPredicted RBP10.35□□□□□ -0.75
NEK9-205ENST00000555405 IL10RBQ08334 325 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 MTA1Q13330 715 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 HNRNPDQ14103 355 aaKnown RBP10.35□□□□□ -0.75
NEK9-205ENST00000555405 HIBCHQ6NVY1 386 aaPredicted RBP10.35□□□□□ -0.75
NEK9-205ENST00000555405 MICALCLQ6ZW33 695 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 PCGF5Q86SE9 256 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 BLOC1S5Q8TDH9 187 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 ANKRD7Q92527 254 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 CHFRQ96EP1 664 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 NOD2Q9HC29 1040 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 ZNF446Q9NWS9 450 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 PLAAQ9Y263 795 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 GRXCR2A6NFK2 248 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 CCL22O00626 93 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 RECQLP46063 649 aaPredicted RBP10.35□□□□□ -0.75
NEK9-205ENST00000555405 MORF4L2Q15014 288 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 DLG2Q15700 870 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 EML3Q32P44 896 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 C2orf27AQ580R0 203 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 CEP85LQ5SZL2 805 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 KCTD16Q68DU8 428 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 EMBQ6PCB8 327 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 Q6ZVU0 165 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 PGBD5Q8N414 524 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 CSGALNACT1Q8TDX6 532 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 AENQ8WTP8 325 aaKnown RBP10.35□□□□□ -0.75
NEK9-205ENST00000555405 SERPINB12Q96P63 405 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 POLR1EQ9GZS1 481 aaKnown RBP10.35□□□□□ -0.75
NEK9-205ENST00000555405 ZDHHC6Q9H6R6 413 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 SAMD15Q9P1V8 674 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 TRHDEQ9UKU6 1024 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 ZDBF2Q9HCK1 2354 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 WASH4PA8MWX3 477 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 INSIG1O15503 277 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 KDELR3O43731 214 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 SASH3O75995 380 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 BMP1P13497 986 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 CTPS1P17812 591 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 HSD17B3P37058 310 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 FDFT1P37268 417 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 ST8SIA6P61647 398 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 RUNX3Q13761 415 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 C3orf62Q6ZUJ4 267 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 CAMK1DQ8IU85 385 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 PNPLA1Q8N8W4 532 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 LPCAT1Q8NF37 534 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 SLCO2A1Q92959 643 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 ATP2A3Q93084 1043 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 HLA-CQ95604 372 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 MLPHQ9BV36 600 aaPredicted RBP10.35□□□□□ -0.75
NEK9-205ENST00000555405 ZNF212Q9UDV6 495 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 TBC1D30Q9Y2I9 924 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 PATJQ8NI35 1801 aa10.35□□□□□ -0.75
NEK9-205ENST00000555405 C2CD4DB7Z1M9 353 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 USP4Q13107 963 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 FUT11Q495W5 492 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 FNDC3BQ53EP0 1204 aaKnown RBP10.34□□□□□ -0.75
NEK9-205ENST00000555405 TTC39BQ5VTQ0 682 aaPredicted RBP10.34□□□□□ -0.75
NEK9-205ENST00000555405 TMC3Q7Z5M5 1100 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 NAT8LQ8N9F0 302 aa10.34□□□□□ -0.75
NEK9-205ENST00000555405 SMRP1Q8NCR6 262 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms